RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 OVCH2Q7RTZ1 564 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 Q8N402 240 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 JAGN1Q8N5M9 183 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 TMEM104Q8NE00 496 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 NPRL2Q8WTW4 380 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 HPSE2Q8WWQ2 592 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 FOXRED1Q96CU9 486 aaPredicted RBP7.09□□□□□ -1.28
BRCA1-208ENST00000468300 BSCL2Q96G97 398 aaPredicted RBP7.09□□□□□ -1.28
BRCA1-208ENST00000468300 A0A1W2PP11 408 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 MEIOCA2RUB1 952 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 METTL21EPA6NDL7 271 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 FOXI3A8MTJ6 420 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-208ENST00000468300 ERVH48-1M5A8F1 160 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 CTDSPLO15194 276 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 TNFRSF6BO95407 300 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 APLNRP35414 380 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 MAP2K3P46734 347 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 ART1P52961 327 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 UBE2NP61088 152 aaKnown RBP7.08□□□□□ -1.28
BRCA1-208ENST00000468300 PLP2Q04941 152 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 MSMPQ1L6U9 139 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 PYDC2Q56P42 97 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 ZBTB37Q5TC79 503 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 MRGPRGQ86SM5 289 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 ANGPTL5Q86XS5 388 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 FAM185AQ8N0U4 392 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 MAFIPQ8WZ33 124 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 PTX4Q96A99 478 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 VKORC1Q9BQB6 163 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 HINT2Q9BX68 163 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 PIGMQ9H3S5 423 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 PLEKHA1Q9HB21 404 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 GPR160Q9UJ42 338 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 ISPDA4D126 451 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 GSTZ1O43708 216 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-208ENST00000468300 CST4P01036 141 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 CA7P43166 264 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 DGCR2P98153 550 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 IGFBP7Q16270 282 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 TBC1D28Q2M2D7 210 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 ALKBH6Q3KRA9 238 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 TIMM23BQ5SRD1 257 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 FBXW12Q6X9E4 464 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 ASCL4Q6XD76 172 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 RAB40AQ8WXH6 277 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 PIGTQ969N2 578 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 RFT1Q96AA3 541 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 NEU1Q99519 415 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 AUNIPQ9H7T9 357 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 OBP2BQ9NPH6 170 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 ADAM30Q9UKF2 790 aa7.08□□□□□ -1.28
BRCA1-208ENST00000468300 ELF5Q9UKW6 265 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-208ENST00000468300 IGKV1-12A0A0C4DH73 117 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 XRCC3O43542 346 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 NRASP01111 189 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 IGKV1D-12P01611 117 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 S100A7P31151 101 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 GPX4P36969 197 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-208ENST00000468300 PTGFRP43088 359 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 UCP2P55851 309 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 TAB1Q15750 504 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 SPATA46Q5T0L3 261 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 BHLHE23Q8NDY6 225 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 CACNG6Q9BXT2 260 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 PCDHB16Q9NRJ7 776 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 KCNK7Q9Y2U2 307 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 IGSF10Q6WRI0 2623 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 USP24Q9UPU5 2620 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 IGHV2OR16-5A0A0B4J2B6 119 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 ZNF816-ZNF321PA0A0X1KG74 233 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 PQLC2LA1A4F0 135 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 RAB27BO00194 218 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 FBXO24O75426 580 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 THBDP07204 575 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 RD3LP0DJH9 198 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 RAB6AP20340 208 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 BTCP35070 178 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 MPV17P39210 176 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 TAS2R20P59543 309 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 GLIPR1L1Q6UWM5 242 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 C19orf18Q8NEA5 215 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 PFDN5Q99471 154 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 NICN1Q9BSH3 213 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 OR2J1Q9GZK6 312 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 EIF3KQ9UBQ5 218 aaKnown RBP7.07□□□□□ -1.28
BRCA1-208ENST00000468300 KLF2Q9Y5W3 355 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-208ENST00000468300 GGT3PA6NGU5 568 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 ZNF850A8MQ14 1090 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 ERCC1P07992 297 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-208ENST00000468300 SRP9P49458 86 aaKnown RBP7.07□□□□□ -1.28
BRCA1-208ENST00000468300 ASAH1Q13510 395 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 C3orf36Q3SXR2 165 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 CALHM1Q8IU99 346 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 OR5D18Q8NGL1 313 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 THAP7Q9BT49 309 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-208ENST00000468300 LPAR5Q9H1C0 372 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 MRPS28Q9Y2Q9 187 aaKnown RBP7.07□□□□□ -1.28
BRCA1-208ENST00000468300 AMDHD2Q9Y303 409 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 CFAP46Q8IYW2 2715 aa7.07□□□□□ -1.28
BRCA1-208ENST00000468300 CD300LBA8K4G0 201 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms