RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 M0QXV9 152 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 TCAPO15273 167 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 POLR3GO15318 223 aaPredicted RBP2.41□□□□□ -2.02
VPS13A-209ENST00000467124 CDK1P06493 297 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 GP1BAP07359 652 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 SLC35E2BP0CK96 405 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 RAB38P57729 211 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 RAB25P57735 213 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 TSPAN5P62079 268 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 DYNLL1P63167 89 aaKnown RBP2.41□□□□□ -2.02
VPS13A-209ENST00000467124 TRDNQ13061 729 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 MAPRE2Q15555 327 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 SP6Q3SY56 376 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 FAM131AQ6UXB0 335 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 BHLHA15Q7RTS1 189 aaPredicted RBP2.41□□□□□ -2.02
VPS13A-209ENST00000467124 H1FOOQ8IZA3 346 aaPredicted RBP2.41□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF615Q8N8J6 731 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 OR2K2Q8NGT1 345 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 OR2Y1Q8NGV0 311 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 OR51Q1Q8NH59 317 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 ORAOV1Q8WV07 137 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 C17orf50Q8WW18 174 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 NELFBQ8WX92 580 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 RBPMSQ93062 196 aaKnown RBP2.41□□□□□ -2.02
VPS13A-209ENST00000467124 LINC00477Q96M19 166 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 RILPQ96NA2 401 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 LINC01587Q99440 93 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 SPIN2AQ99865 258 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 SPIN2BQ9BPZ2 258 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF649Q9BS31 505 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF436Q9C0F3 470 aaPredicted RBP2.41□□□□□ -2.02
VPS13A-209ENST00000467124 NXF2Q9GZY0 626 aaKnown RBP2.41□□□□□ -2.02
VPS13A-209ENST00000467124 LINC00574Q9H8X3 128 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 RBM22Q9NW64 420 aaKnown RBP eCLIP2.41□□□□□ -2.02
VPS13A-209ENST00000467124 SCML1Q9UN30 329 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 SLIT3O75094 1523 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 TMEM131Q92545 1883 aa2.41□□□□□ -2.02
VPS13A-209ENST00000467124 NPHP4O75161 1426 aaPredicted RBP2.41□□□□□ -2.02
VPS13A-209ENST00000467124 CDIPTO14735 213 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 SCN2BO60939 215 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 SNAP29O95721 258 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 CXorf1O96002 111 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 NTF3P20783 257 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 ERFP50548 548 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 CCL23P55773 120 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 OR10A3P58181 314 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 MEF2CQ06413 473 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-209ENST00000467124 RAB31Q13636 194 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 FLOT2Q14254 428 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 ELOCQ15369 112 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 TOMM34Q15785 309 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-209ENST00000467124 USF2Q15853 346 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-209ENST00000467124 BSXQ3C1V8 233 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 KCTD16Q68DU8 428 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 MED27Q6P2C8 311 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 SLC25A34Q6PIV7 304 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 UNQ9165/PRO28630Q6UXU0 137 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 FAM231DQ6ZW35 169 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 LINC00596Q86U02 117 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 CYP4Z1Q86W10 505 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 OR4K17Q8NGC6 315 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 CCDC12Q8WUD4 166 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-209ENST00000467124 RTN4IP1Q8WWV3 396 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-209ENST00000467124 CCDC127Q96BQ5 260 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 PGLYRP3Q96LB9 341 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 APOL4Q9BPW4 351 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 MED10Q9BTT4 135 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 TAPBPLQ9BX59 468 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 ULBP1Q9BZM6 244 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 SRRQ9GZT4 340 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 SLC25A31Q9H0C2 315 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 GMEB1Q9Y692 573 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF780BQ9Y6R6 833 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 URGCP-MRPS24S4R325 110 aa2.4□□□□□ -2.03
VPS13A-209ENST00000467124 LRCOL1A6NCL2 159 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 OR2AT4A6NND4 320 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 A8MWL6 223 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 RNASEK-C17orf49H0YIS7 233 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 RPL36A-HNRNPH2H7BZ11 118 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 CLDN34H7C241 214 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 PLPP3O14495 311 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 CDRT1O95170 752 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 FADS2O95864 444 aaKnown RBP2.39□□□□□ -2.03
VPS13A-209ENST00000467124 OR4Q2P0C623 313 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 NELFEP18615 380 aaKnown RBP2.39□□□□□ -2.03
VPS13A-209ENST00000467124 TEAD1P28347 426 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 S100A2P29034 98 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 SLC18A1P54219 525 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 ATP5G2Q06055 141 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 BTN1A1Q13410 526 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 SSX1Q16384 188 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 LY6EQ16553 131 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 CEACAM21Q3KPI0 293 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF678Q5SXM1 525 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 ERICH5Q6P6B1 374 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 USP50Q70EL3 339 aaPredicted RBP2.39□□□□□ -2.03
VPS13A-209ENST00000467124 FA2HQ7L5A8 372 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 GALNT10Q86SR1 603 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 TMEM25Q86YD3 366 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms