RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 CDK2P24941 298 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 SOX6P35712 828 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 PIN1Q13526 163 aaPredicted RBP9.5□□□□□ -0.89
UBR4-210ENST00000466969 RBMS2Q15434 407 aaKnown RBP9.5□□□□□ -0.89
UBR4-210ENST00000466969 PTCHD4Q6ZW05 846 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 ZDHHC21Q8IVQ6 265 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 OR8H2Q8N162 312 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 TPRX1Q8N7U7 411 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 ZNF781Q8N8C0 355 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 Q8N9W7 124 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 GTF2H4Q92759 462 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 HSPB9Q9BQS6 159 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 GGTLC1Q9BX51 225 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 POLR2J2Q9GZM3 115 aaKnown RBP9.5□□□□□ -0.89
UBR4-210ENST00000466969 POLR2J3Q9H1A7 115 aaKnown RBP9.5□□□□□ -0.89
UBR4-210ENST00000466969 WFDC10AQ9H1F0 79 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 OR6C3Q9NZP0 311 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 FBXL17Q9UF56 701 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 ZNF580Q9UK33 172 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 APLNQ9ULZ1 77 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 B9D1Q9UPM9 204 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 AMMECR1Q9Y4X0 333 aaPredicted RBP9.5□□□□□ -0.89
UBR4-210ENST00000466969 FLG2Q5D862 2391 aaPredicted RBP9.5□□□□□ -0.89
UBR4-210ENST00000466969 A0A1W2PPI3 338 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 IGLL5B9A064 214 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 CST4P01036 141 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 IGLV1-40P01703 118 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 CD7P09564 240 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 CD34P28906 385 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 PPIFP30405 207 aaKnown RBP9.49□□□□□ -0.89
UBR4-210ENST00000466969 NPBWR2P48146 333 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 CKAP4Q07065 602 aaKnown RBP9.49□□□□□ -0.89
UBR4-210ENST00000466969 KLHL12Q53G59 568 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 FAM156AQ8NDB6 213 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 IFT81Q8WYA0 676 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 MFFQ9GZY8 342 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 GAL3ST2Q9H3Q3 398 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 SLC25A19Q9HC21 320 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 MRM2Q9UI43 246 aaKnown RBP9.49□□□□□ -0.89
UBR4-210ENST00000466969 PIGLQ9Y2B2 252 aa9.49□□□□□ -0.89
UBR4-210ENST00000466969 IZUMO1RA6ND01 250 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 SPRY2O43597 315 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 CDKN2AP42771 156 aaKnown RBP9.48□□□□□ -0.89
UBR4-210ENST00000466969 RAB7AP51149 207 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 RAB40BQ12829 278 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 MRGPRG-AS1Q2M3A8 158 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 ZBED5Q49AG3 693 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 SERTAD4-AS1Q5TG53 156 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 HEPN1Q6WQI6 88 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 ZBTB46Q86UZ6 589 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 LAX1Q8IWV1 398 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 OR8H3Q8N146 312 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 SYT8Q8NBV8 401 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 LZICQ8WZA0 190 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 FN3KQ9H479 309 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 VIPAS39Q9H9C1 493 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 CENPMQ9NSP4 180 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 CORO2BQ9UQ03 480 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 TP53TG1Q9Y2A0 90 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 SH3GLB1Q9Y371 365 aa9.48□□□□□ -0.89
UBR4-210ENST00000466969 UBE2J1Q9Y385 318 aaPredicted RBP9.48□□□□□ -0.89
UBR4-210ENST00000466969 MSGN1A6NI15 193 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 EVPLLA8MZ36 301 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 ZNF737O75373 536 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 CASQ1P31415 396 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 GALEQ14376 348 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 LGALS9BQ3B8N2 356 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 NRMQ8IXM6 262 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 C11orf65Q8NCR3 313 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 OR9G4Q8NGQ1 327 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 RASSF5Q8WWW0 418 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 EAF1Q96JC9 268 aaPredicted RBP9.47□□□□□ -0.89
UBR4-210ENST00000466969 SNX22Q96L94 193 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 DGCR6LQ9BY27 220 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 MBNL3Q9NUK0 354 aaKnown RBP9.47□□□□□ -0.89
UBR4-210ENST00000466969 SLC25A37Q9NYZ2 338 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 FBXL7Q9UJT9 491 aa9.47□□□□□ -0.89
UBR4-210ENST00000466969 LOC102724200A0A096LPH7 203 aaPredicted RBP9.46□□□□□ -0.9
UBR4-210ENST00000466969 G3V318 75 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 RIPK2O43353 540 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 IDO1P14902 403 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 HOXB9P17482 250 aaPredicted RBP9.46□□□□□ -0.9
UBR4-210ENST00000466969 RPS27P42677 84 aaKnown RBP9.46□□□□□ -0.9
UBR4-210ENST00000466969 CX3CR1P49238 355 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 RPL14P50914 215 aaKnown RBP9.46□□□□□ -0.9
UBR4-210ENST00000466969 POLR2JP52435 117 aaKnown RBP9.46□□□□□ -0.9
UBR4-210ENST00000466969 NANOS2P60321 138 aaKnown RBP9.46□□□□□ -0.9
UBR4-210ENST00000466969 ST3GAL3Q11203 375 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 EBI3Q14213 229 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 KPNB1Q14974 876 aaKnown RBP9.46□□□□□ -0.9
UBR4-210ENST00000466969 CEP78Q5JTW2 689 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 FAM57BQ71RH2 274 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 TRMT10CQ7L0Y3 403 aaKnown RBP9.46□□□□□ -0.9
UBR4-210ENST00000466969 BATF2Q8N1L9 274 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 OR2T10Q8NGZ9 312 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 S1PR3Q99500 378 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 BARHL1Q9BZE3 327 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 OR10A2Q9H208 303 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 NRIP3Q9NQ35 241 aa9.46□□□□□ -0.9
UBR4-210ENST00000466969 COPS3Q9UNS2 423 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms