RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 VAMP5O95183 116 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 SNAP29O95721 258 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 RLN2P04090 185 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 ZNF688P0C7X2 276 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 ZNF806P0C7X5 589 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 C1GALT1C1LP0DN25 315 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 HLA-GP17693 338 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 ME2P23368 584 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 RPA3P35244 121 aaPredicted RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 ANP32AP39687 249 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 TTPAP49638 278 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 ACOT2P49753 483 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 SLC18A1P54219 525 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 PLTPP55058 493 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 AQP5P55064 265 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 OR10A3P58181 314 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 UBE2G2P60604 165 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 GRB2P62993 217 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 PRKCDQ05655 676 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 RAB31Q13636 194 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 MAPRE2Q15555 327 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 CCL15Q16663 113 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 CEACAM16Q2WEN9 425 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 CEACAM21Q3KPI0 293 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 SLC25A35Q3KQZ1 300 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 RBM48Q5RL73 367 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 AP1ARQ63HQ0 302 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 GUSBP11Q6P575 273 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 NTM-AS1Q6ZSK4 140 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 WDR86Q86TI4 376 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 MRPL52Q86TS9 123 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 CRLF3Q8IUI8 442 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 BBS7Q8IWZ6 715 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 UBALD2Q8IYN6 164 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 TMEM256Q8N2U0 113 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 TTLQ8NG68 377 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 OR4M2Q8NGB6 313 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 OR4K17Q8NGC6 315 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 OR4M1Q8NGD0 313 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 OR1L1Q8NH94 360 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 OR2AE1Q8NHA4 323 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 UBA3Q8TBC4 463 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 SYNPRQ8TBG9 265 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 C22orf15Q8WYQ4 148 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 HGDQ93099 445 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 CCDC127Q96BQ5 260 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 S100PBPQ96BU1 408 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 RBMXL1Q96E39 390 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 MRPL48Q96GC5 212 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 NARS2Q96I59 477 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 ARL5BQ96KC2 179 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 OR10C1Q96KK4 312 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 C18orf15Q96N68 181 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 RILPQ96NA2 401 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 QKIQ96PU8 341 aaKnown RBP eCLIP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 TBL1YQ9BQ87 522 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 ZNF251Q9BRH9 671 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 C7orf50Q9BRJ6 194 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 NUDT9Q9BW91 350 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 ANGPTL4Q9BY76 406 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 MRPL20Q9BYC9 149 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 NXF2Q9GZY0 626 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 C8orf17Q9NRJ1 99 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 SDHAF3Q9NRP4 125 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 ZNF355PQ9NSJ1 428 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 PRO0628Q9UI54 55 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 SLC22A14Q9Y267 594 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 SNX24Q9Y343 169 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 PUS1Q9Y606 427 aaKnown RBP eCLIP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 USH1CQ9Y6N9 552 aa1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 NPHP4O75161 1426 aaPredicted RBP1.21□□□□□ -2.22
GTF3C3-209ENST00000466862 GPATCH8Q9UKJ3 1502 aaKnown RBP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 ABCB11O95342 1321 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 IGKV3D-11A0A0A0MRZ8 115 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 IGHV3-72A0A0B4J1Y9 119 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 A0A1B0GX12 115 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 TMEM213A2RRL7 107 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 RBFOX3A6NFN3 312 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 CENPBD1B2RD01 187 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 CLDN34H7C241 214 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 UPK2O00526 184 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 ITGB1BP1O14713 200 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 UBDO15205 165 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 RBFOX2O43251 390 aaKnown RBP eCLIP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 AQP9O43315 295 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 ZNF207O43670 478 aaKnown RBP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 PLIN3O60664 434 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 IGLV2-8P01709 118 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 HLA-DQA1P01909 254 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 ADRA2AP08913 450 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 OCMP0CE72 109 aaPredicted RBP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 PET100P0DJ07 73 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 ZNF3P17036 446 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 IL3RAP26951 378 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 OPRK1P41145 380 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 GCLMP48507 274 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 PPP1CAP62136 330 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 RPL10AP62906 217 aaKnown RBP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 CD164Q04900 197 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 PIGHQ14442 188 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms