RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 MESTQ5EB52 335 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 XKR7Q5GH72 579 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 GCSAMLQ5JQS6 135 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 COL5A1-AS1Q5SY13 56 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 TPRG1LQ5T0D9 272 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 FAM71E1Q6IPT2 247 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 FAM45BPQ6NSW5 357 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 SMARCD3Q6STE5 483 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 DRAM2Q6UX65 266 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 ASCL4Q6XD76 172 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 Q6ZPB1 254 aaPredicted RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 ACOT7LQ6ZUV0 252 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 STRADAQ7RTN6 431 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 PDZD9Q8IXQ8 264 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 ATP6V1C2Q8NEY4 427 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 OR4E2Q8NGC2 313 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 OR10R2Q8NGX6 335 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 OR51F2Q8NH61 342 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 OR10A6Q8NH74 314 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 KCNG3Q8TAE7 436 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 SPPL2BQ8TCT7 592 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 ASB13Q8WXK3 278 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 GLYATL1Q969I3 302 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 FCRL1Q96LA6 429 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 ERMAPQ96PL5 475 aaPredicted RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 OR52E6Q96RD3 313 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 NPAS2Q99743 824 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 GPA33Q99795 319 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 SLC6A7Q99884 636 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 LXNQ9BS40 222 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 ALG12Q9BV10 488 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 RIOK2Q9BVS4 552 aaKnown RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 SLIRPQ9GZT3 109 aaKnown RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 C20orf85Q9H1P6 137 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 ABCG5Q9H222 651 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 BOLA2Q9H3K6 86 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 DHX35Q9H5Z1 703 aaKnown RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 AKIRIN1Q9H9L7 192 aaPredicted RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 SMCO4Q9NRQ5 59 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 OPTCQ9UBM4 332 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 SAMD4AQ9UPU9 718 aaKnown RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 NEU3Q9UQ49 428 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 MRPS33Q9Y291 106 aaKnown RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 SLC35A3Q9Y2D2 325 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 CARHSP1Q9Y2V2 147 aaKnown RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 TSSC4Q9Y5U2 329 aaPredicted RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 KPTNQ9Y664 436 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 AFDNP55196 1824 aaKnown RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 LAMA4Q16363 1823 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 ARHGAP5Q13017 1502 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 KIAA0556O60303 1618 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 DEPDC5O75140 1603 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 FMN2Q9NZ56 1722 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 A0A0A6YYD4 124 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TRAV39A0A0B4J263 110 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 A0A0G2JN53 185 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 A0A0G2JND7 137 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 A0A1B0GVI7 797 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF99A8MXY4 864 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 B4DXG7 233 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 RPL36A-HNRNPH2H7BZ11 118 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 M0QXV9 152 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 FAAHO00519 579 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 DLGAP1O14490 977 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 UBFD1O14562 309 aaKnown RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 EI24O14681 340 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 CCL25O15444 150 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 MAGEB4O15481 346 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 FABP7O15540 132 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 LRP3O75074 770 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 UPK3AO75631 287 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 GLSO94925 669 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 IGSF6O95976 241 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 ACTL6AO96019 429 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 MT-ND4LP03901 98 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 SERPIND1P05546 499 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 HIST1H2AGP0C0S8 130 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 PET100P0DJ07 73 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TDGF1P13385 188 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 MGMTP16455 207 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 AKR1C4P17516 323 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 ADORA1P30542 326 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 BRS3P32247 399 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 ACVR1BP36896 505 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 PPT1P50897 306 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 CRISP1P54107 249 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TAS2R41P59536 307 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 RANP62826 216 aaKnown RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 HMGCS1Q01581 520 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 CAV1Q03135 178 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 OR5I1Q13606 314 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 KCTD19Q17RG1 926 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 QRICH1Q2TAL8 776 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 ADPRMQ3LIE5 342 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF658BQ4V348 819 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 C10orf91Q5T1B1 145 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM236Q5W0B7 351 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 HIST2H2AA3Q6FI13 130 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 XAF1Q6GPH4 301 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 RTL6Q6ICC9 239 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms