RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 CYTIPO60759 359 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 CRTAPO75718 401 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-207ENST00000463477 M6PRP20645 277 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 CPT2P23786 658 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 FPR2P25090 351 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 GRNP28799 593 aaKnown RBP8.56□□□□□ -1.04
PTPRD-207ENST00000463477 SLC6A9P48067 706 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 PCBD1P61457 104 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 IL13RA1P78552 427 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 SURF2Q15527 256 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-207ENST00000463477 SLC22A6Q4U2R8 563 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 TMEM128Q5BJH2 165 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 PDSS1Q5T2R2 415 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 C1QTNF12Q5T7M4 302 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 HIST2H2BCQ6DN03 193 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 RGS7BPQ6MZT1 257 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-207ENST00000463477 C11orf87Q6NUJ2 197 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 ZNF546Q86UE3 836 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 TMEM17Q86X19 198 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 NAXEQ8NCW5 288 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 OR1F12Q8NHA8 337 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 CPNE4Q96A23 557 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-207ENST00000463477 POM121Q96HA1 1249 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 ARHGAP5-AS1Q96IT6 56 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 RGCCQ9H4X1 137 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 TNFSF18Q9UNG2 199 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 CRYBG3Q68DQ2 2970 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 RTTNQ86VV8 2226 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 CELSR2Q9HCU4 2923 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 IGKV3D-15A0A087WSY6 115 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 hCG_1807616A0A1W2PRN6 198 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 C5orf63A6NC05 138 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 IL18BPO95998 194 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 CSN2P05814 226 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 NMBP08949 121 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 FAHP16930 419 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 PRKACBP22694 351 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 ECI1P42126 302 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 CYCSP99999 105 aaKnown RBP8.56□□□□□ -1.04
PTPRD-207ENST00000463477 TFF3Q07654 80 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 BAMBIQ13145 260 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 TMEM42Q69YG0 159 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 ZNF660Q6AZW8 331 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-207ENST00000463477 ASCL4Q6XD76 172 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 AAED1Q7RTV5 226 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 LRRC18Q8N456 261 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 C9orf106Q8NAJ2 232 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 SEMA6DQ8NFY4 1073 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 OR51T1Q8NGJ9 327 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 OR5H2Q8NGV7 314 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 SGK3Q96BR1 496 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 PHYHIPLQ96FC7 376 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 TECTBQ96PL2 329 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 PECRQ9BY49 303 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 NMES1Q9C002 83 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 BANF2Q9H503 90 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 FN3KRPQ9HA64 309 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 NUP50Q9UKX7 468 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 PIGLQ9Y2B2 252 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 ARHGAP21Q5T5U3 1957 aa8.56□□□□□ -1.04
PTPRD-207ENST00000463477 TRBV6-7A0A0A0MS04 114 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 A0A1B0GW55 424 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 RAD51DO75771 328 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 CRYZL1O95825 349 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 PMP2P02689 132 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 CRHP06850 196 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 DUX4L2P0CJ85 424 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 DUX4L3P0CJ86 424 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 DUX4L4P0CJ87 422 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 DUX4L5P0CJ88 424 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 DUX4L6P0CJ89 424 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 DUX4L7P0CJ90 424 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 FCGR2AP12318 317 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 OPRM1P35372 400 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 ARFRP1Q13795 201 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 CNN3Q15417 329 aaKnown RBP8.55□□□□□ -1.04
PTPRD-207ENST00000463477 SFRP5Q5T4F7 317 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 C17orf107Q6ZR85 190 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 ACOT7LQ6ZUV0 252 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 EIF4E3Q8N5X7 224 aaKnown RBP8.55□□□□□ -1.04
PTPRD-207ENST00000463477 OR10D3Q8NH80 312 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 RBPMSQ93062 196 aaKnown RBP8.55□□□□□ -1.04
PTPRD-207ENST00000463477 Q96M66 194 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 S100A13Q99584 98 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 SPOCK3Q9BQ16 436 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 REG4Q9BYZ8 158 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 LINC00470Q9BZP3 86 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 SLC25A32Q9H2D1 315 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 CRLF2Q9HC73 371 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 DUX4Q9UBX2 424 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 HSF4Q9ULV5 492 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 EDARQ9UNE0 448 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 ZNF175Q9Y473 711 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 TIMM10BQ9Y5J6 103 aa8.55□□□□□ -1.04
PTPRD-207ENST00000463477 INTS1Q8N201 2190 aaKnown RBP8.55□□□□□ -1.04
PTPRD-207ENST00000463477 A0A1W2PP11 408 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 NKX2-6A6NCS4 301 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 MFSD2BA6NFX1 497 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 SLC22A20A6NK97 555 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 C19orf84I3L1E1 186 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms