RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 BNIP2Q12982 314 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 MOBPQ13875 183 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 SHHQ15465 462 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 TRAM1Q15629 374 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 BSXQ3C1V8 233 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 ACTBL2Q562R1 376 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 UBE2NLQ5JXB2 153 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 ZNF773Q6PK81 442 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 IGFL3Q6UXB1 125 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 CASP12Q6UXS9 341 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 AHSA2Q719I0 299 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 LRRC8AQ8IWT6 810 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 OSR2Q8N2R0 312 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 MIR7-3HGQ8N6C7 128 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 SPANXA2-OT1Q8N9U9 137 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 APCDD1LQ8NCL9 501 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 BLNKQ8WV28 456 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 ZMYND19Q96E35 227 aaPredicted RBP1.86□□□□□ -2.11
VCL-203ENST00000461383 CPB2Q96IY4 423 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 ZNF75AQ96N20 296 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 ZFP3Q96NJ6 502 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 DERL3Q96Q80 235 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 ZNF2Q9BSG1 426 aaPredicted RBP1.86□□□□□ -2.11
VCL-203ENST00000461383 RSPO3Q9BXY4 272 aaPredicted RBP1.86□□□□□ -2.11
VCL-203ENST00000461383 SRRQ9GZT4 340 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 NXF2Q9GZY0 626 aaKnown RBP1.86□□□□□ -2.11
VCL-203ENST00000461383 CHMP4BQ9H444 224 aaKnown RBP1.86□□□□□ -2.11
VCL-203ENST00000461383 IFT46Q9NQC8 304 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 PARP11Q9NR21 331 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 IL37Q9NZH6 218 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 MRM2Q9UI43 246 aaKnown RBP1.86□□□□□ -2.11
VCL-203ENST00000461383 ZNF780BQ9Y6R6 833 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 ELP1O95163 1332 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 YEATS2Q9ULM3 1422 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 LOC389332A0A1B0GUA5 103 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 RBFOX3A6NFN3 312 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 ZNF98A6NK75 572 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 MFNGO00587 321 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 UBDO15205 165 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 COX7A2P2O60397 106 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 SNAP29O95721 258 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 FADS2O95864 444 aaKnown RBP1.85□□□□□ -2.11
VCL-203ENST00000461383 NRASP01111 189 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 HRASP01112 189 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 KRASP01116 189 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 IGKV1D-16P01601 117 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 CD8AP01732 235 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 PRB2P02812 416 aaPredicted RBP1.85□□□□□ -2.11
VCL-203ENST00000461383 NTF3P20783 257 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 TTPAP49638 278 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 KRTAP10-8P60410 259 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 ELOCQ15369 112 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 KCTD16Q68DU8 428 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 FA2HQ7L5A8 372 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 COPS6Q7L5N1 327 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 C10orf107Q8IVU9 208 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 GAPTQ8N292 157 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 SLC35G3Q8N808 338 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 ZDHHC22Q8N966 263 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 CDRT4Q8N9R6 151 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 OR4K17Q8NGC6 315 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 OR5H2Q8NGV7 314 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 OR6K3Q8NGY3 331 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 OR52N1Q8NH53 320 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 UBA3Q8TBC4 463 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 FAM57AQ8TBR7 257 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 RMI2Q96E14 147 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 ANAPC13Q9BS18 74 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 ZNF649Q9BS31 505 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 OR2S2Q9NQN1 319 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 CA10Q9NS85 328 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 SLC22A14Q9Y267 594 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 POFUT2Q9Y2G5 429 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 KLF13Q9Y2Y9 288 aaPredicted RBP1.85□□□□□ -2.11
VCL-203ENST00000461383 SLC22A7Q9Y694 548 aa1.85□□□□□ -2.11
VCL-203ENST00000461383 IGKV1-6A0A0C4DH72 117 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 KIR2DS1A0A191URI9 304 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 OR2AT4A6NND4 320 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 F8VP50 259 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SULT1C2O00338 296 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 POLR3GO15318 223 aaPredicted RBP1.84□□□□□ -2.11
VCL-203ENST00000461383 SLC37A4O43826 429 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 CNMDO75829 334 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 IGKV1-39P01597 117 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 IGKV1D-39P04432 117 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SCGB1C2P0DMR2 95 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 PRTN3P24158 256 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 PSMB9P28065 219 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SLC6A1P30531 599 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 MAGEA3P43357 314 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 IDH2P48735 452 aaKnown RBP1.84□□□□□ -2.11
VCL-203ENST00000461383 ELF3P78545 371 aaPredicted RBP1.84□□□□□ -2.11
VCL-203ENST00000461383 XRCC4Q13426 336 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 FLOT2Q14254 428 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SSX1Q16384 188 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 LY6EQ16553 131 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 CEACAM16Q2WEN9 425 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 ZNF404Q494X3 552 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 DNLZQ5SXM8 178 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 MORN3Q6PF18 240 aaPredicted RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms