RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 SHARPINQ9H0F6 387 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 POLR2J3Q9H1A7 115 aaKnown RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 PPIL3Q9H2H8 161 aaKnown RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 OR52D1Q9H346 318 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 KCNK15Q9H427 330 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 FN3KQ9H479 309 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 KRCC1Q9NPI7 259 aaPredicted RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 YAE1D1Q9NRH1 226 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 MED29Q9NX70 200 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 MTCH1Q9NZJ7 389 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 CLCF1Q9UBD9 225 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 GLS2Q9UI32 602 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 PSG11Q9UQ72 335 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 SIGLEC7Q9Y286 467 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 COL12A1Q99715 3063 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 RP1L1Q8IWN7 2480 aaPredicted RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 ADGRG4Q8IZF6 3080 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 TMEM272A0A1B0GTI8 110 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 A0A1W2PNV4 684 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 H3BN98 237 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 PLPP3O14495 311 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ARPC3O15145 178 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF208O43345 1280 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 RNF13O43567 381 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SNAI2O43623 268 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SLC19A2O60779 497 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 DFFBO76075 338 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SLC22A5O76082 557 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SLC2A10O95528 541 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 PMS2P2O95744 297 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 IGHV3-9P01782 118 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ALPLP05186 524 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ASAH2BP0C7U1 165 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 RD3LP0DJH9 198 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ADORA3P0DMS8 318 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF250P15622 560 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SLC6A1P30531 599 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 RBP2P50120 134 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 MMP15P51511 669 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 CCR6P51684 374 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 PRKXP51817 358 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 HMGA2P52926 109 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 CTBP2P56545 445 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SMIM11AP58511 58 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 RAB11AP62491 216 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 CSNK2A1P68400 391 aaPredicted RBP4.26□□□□□ -1.73
SF3A3-202ENST00000460925 MYBPC1Q00872 1141 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 IL5RAQ01344 420 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 POU3F1Q03052 451 aaPredicted RBP4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SLC34A1Q06495 639 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 APOFQ13790 326 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 EFNB3Q15768 340 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 RAB11BQ15907 218 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 RFX4Q33E94 735 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 MS4A18Q3C1V0 323 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 BSXQ3C1V8 233 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ACSF3Q4G176 576 aaPredicted RBP4.26□□□□□ -1.73
SF3A3-202ENST00000460925 NSUN5P2Q63ZY6 315 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 KDM4DQ6B0I6 523 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 FAHD1Q6P587 224 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SMARCD3Q6STE5 483 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 IZUMO2Q6UXV1 221 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 Q6ZSV7 163 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 KCTD8Q6ZWB6 473 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 FCRLAQ7L513 359 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF367Q7RTV3 350 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 OAFQ86UD1 273 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 BOD1L2Q8IYS8 172 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 PARP8Q8N3A8 854 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 MARVELD2Q8N4S9 558 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 CCDC71LQ8N9Z2 235 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 CSNK2A3Q8NEV1 391 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 DMBX1Q8NFW5 382 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 OR9K2Q8NGE7 335 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 OR4Q3Q8NH05 313 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 OR5J2Q8NH18 312 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 MFSD8Q8NHS3 518 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 STOML3Q8TAV4 291 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 FAM57AQ8TBR7 257 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 GNPDA2Q8TDQ7 276 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SFT2D1Q8WV19 159 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ZHX1-C8orf76Q96EF9 292 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 URB1-AS1Q96HZ7 61 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 RNF170Q96K19 258 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SLC38A2Q96QD8 506 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SLC30A2Q9BRI3 323 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 TCEAL7Q9BRU2 100 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 EMC6Q9BV81 110 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 KATNB1Q9BVA0 655 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 TAPBPLQ9BX59 468 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 GABARAPL1Q9H0R8 117 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SLITRK2Q9H156 845 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ANKRD19PQ9H560 264 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF430Q9H8G1 570 aaPredicted RBP4.26□□□□□ -1.73
SF3A3-202ENST00000460925 FKRPQ9H9S5 495 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF556Q9HAH1 456 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ABCB9Q9NP78 766 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 TAS2R5Q9NYW4 299 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 B3GAT1Q9P2W7 334 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF346Q9UL40 294 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms