RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SMURF1Q9HCE7 757 aa18.73■□□□□ 0.59
C9orf3-209ENST00000460573 SNTG1Q9NSN8 517 aa18.73■□□□□ 0.59
C9orf3-209ENST00000460573 YLPM1P49750 1951 aaKnown RBP18.72■□□□□ 0.59
C9orf3-209ENST00000460573 NKX6-3A6NJ46 265 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 A8MXK9 166 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 KNG1P01042 644 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 PSG2P11465 335 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 ZNF16P17020 682 aaPredicted RBP18.72■□□□□ 0.59
C9orf3-209ENST00000460573 JUNBP17275 347 aaPredicted RBP18.72■□□□□ 0.59
C9orf3-209ENST00000460573 PTGFRP43088 359 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 PITPNBP48739 271 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 BMXP51813 675 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 GP2P55259 537 aaKnown RBP18.72■□□□□ 0.59
C9orf3-209ENST00000460573 FAM27D1Q5T7N8 215 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 RNF144BQ7Z419 303 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 TNFAIP8L1Q8WVP5 186 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 BEX2Q9BXY8 128 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 SEBOXQ9HB31 216 aaPredicted RBP18.72■□□□□ 0.59
C9orf3-209ENST00000460573 CDC42EP3Q9UKI2 254 aa18.72■□□□□ 0.59
C9orf3-209ENST00000460573 POLR3KQ9Y2Y1 108 aaPredicted RBP18.72■□□□□ 0.59
C9orf3-209ENST00000460573 TMPRSS2O15393 492 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 ANGPTL7O43827 346 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 TGFAP01135 160 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 MSMBP08118 114 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 GNB2P62879 340 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 BLMHQ13867 455 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 C11orf91Q3C1V1 193 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 GLT8D1Q68CQ7 371 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 FAM166AQ6J272 317 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 ASCL4Q6XD76 172 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 ZNF788Q6ZQV5 615 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 FAM58AQ8N1B3 248 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 OR5T2Q8NGG2 359 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 EMG1Q92979 244 aaKnown RBP18.71■□□□□ 0.59
C9orf3-209ENST00000460573 S100A13Q99584 98 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 CCL13Q99616 98 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 UQCC2Q9BRT2 126 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 SSBP3Q9BWW4 388 aaPredicted RBP18.71■□□□□ 0.59
C9orf3-209ENST00000460573 SHARPINQ9H0F6 387 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 PPIL3Q9H2H8 161 aaKnown RBP18.71■□□□□ 0.59
C9orf3-209ENST00000460573 CLN8Q9UBY8 286 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 KCNS2Q9ULS6 477 aa18.71■□□□□ 0.59
C9orf3-209ENST00000460573 IGKV1D-17A0A075B6S4 117 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 TRAV20A0A0B4J274 112 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 PPIAL4CA0A0B4J2A2 164 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 IGKV1-12A0A0C4DH73 117 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 GPR37O15354 613 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 IGKV1D-12P01611 117 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 BCL3P20749 454 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 NPBWR2P48146 333 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 DVL1P1P54792 670 aaPredicted RBP18.7■□□□□ 0.58
C9orf3-209ENST00000460573 IL13RA1P78552 427 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 SPIN3Q5JUX0 258 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 ZNF841Q6ZN19 808 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 LRRTM1Q86UE6 522 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 GLCCI1Q86VQ1 547 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 JAGN1Q8N5M9 183 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 SDSLQ96GA7 329 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 PCDHB16Q9NRJ7 776 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 CTSZQ9UBR2 303 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 LPAR3Q9UBY5 353 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 GLS2Q9UI32 602 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 ZNF222Q9UK12 451 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 STUB1Q9UNE7 303 aa18.7■□□□□ 0.58
C9orf3-209ENST00000460573 RFPL4AA6NLU0 287 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 RFPL4AL1F8VTS6 287 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 F8VVB4 439 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 F8VWA3 439 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 SIGLEC5O15389 551 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 NDUFB3O43676 98 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 ZNF780AO75290 641 aaPredicted RBP18.69■□□□□ 0.58
C9orf3-209ENST00000460573 CALRP27797 417 aaKnown RBP18.69■□□□□ 0.58
C9orf3-209ENST00000460573 FGF9P31371 208 aaPredicted RBP18.69■□□□□ 0.58
C9orf3-209ENST00000460573 PRDX2P32119 198 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 GABRA2P47869 451 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 SEC61A1P61619 476 aaKnown RBP18.69■□□□□ 0.58
C9orf3-209ENST00000460573 RSU1Q15404 277 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 WDR25Q64LD2 544 aaPredicted RBP18.69■□□□□ 0.58
C9orf3-209ENST00000460573 ELP2Q6IA86 826 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 BATF2Q8N1L9 274 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 TMEM186Q96B77 213 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 MRPS26Q9BYN8 205 aaKnown RBP18.69■□□□□ 0.58
C9orf3-209ENST00000460573 FAM192AQ9GZU8 254 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 METTL9Q9H1A3 318 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 HMG20AQ9NP66 347 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 RBFOX1Q9NWB1 397 aaKnown RBP18.69■□□□□ 0.58
C9orf3-209ENST00000460573 IL36GQ9NZH8 169 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 SSR3Q9UNL2 185 aa18.69■□□□□ 0.58
C9orf3-209ENST00000460573 CD37P11049 281 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 ADRA2CP18825 462 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 AMY2BP19961 511 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 GATA3P23771 443 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 RANBP1P43487 201 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 OR3A4PP47883 348 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 MTNR1BP49286 362 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 PSMD7P51665 324 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 GPR176Q14439 515 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 ZNF146Q15072 292 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 LRRC10Q5BKY1 277 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 CD276Q5ZPR3 534 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms