RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 BORCS8Q96FH0 119 aa18.48■□□□□ 0.55
PTPN4-207ENST00000460162 MTCH1Q9NZJ7 389 aa18.48■□□□□ 0.55
PTPN4-207ENST00000460162 IGKV1-27A0A075B6S5 117 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 VGLL3A8MV65 326 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 SERPINA3P01011 423 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 CDC42P60953 191 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 HERPUD1Q15011 391 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 Q6ZTK2 550 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 GDPD3Q7L5L3 318 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 Q8IYB0 196 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 OR8H2Q8N162 312 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 PRSS35Q8N3Z0 413 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 DTX3Q8N9I9 347 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 OR2T6Q8NHC8 308 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 PP6455Q8WZ26 134 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 SLAMF9Q96A28 289 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 EME1Q96AY2 570 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 FOXRED1Q96CU9 486 aaPredicted RBP18.47■□□□□ 0.55
PTPN4-207ENST00000460162 NPFFR1Q9GZQ6 430 aa18.47■□□□□ 0.55
PTPN4-207ENST00000460162 TBL2Q9Y4P3 447 aaKnown RBP18.47■□□□□ 0.55
PTPN4-207ENST00000460162 FAM90A8PA6NJQ4 464 aa18.46■□□□□ 0.55
PTPN4-207ENST00000460162 ODF3BA8MYP8 253 aa18.46■□□□□ 0.55
PTPN4-207ENST00000460162 H3BSH0 61 aa18.46■□□□□ 0.55
PTPN4-207ENST00000460162 CSF1P09603 554 aa18.46■□□□□ 0.55
PTPN4-207ENST00000460162 ZNF728P0DKX0 622 aa18.46■□□□□ 0.55
PTPN4-207ENST00000460162 PAX6P26367 422 aa18.46■□□□□ 0.55
PTPN4-207ENST00000460162 EDDM3BP56851 147 aa18.46■□□□□ 0.55
PTPN4-207ENST00000460162 OR13D1Q8NGV5 346 aa18.46■□□□□ 0.55
PTPN4-207ENST00000460162 GNG8Q9UK08 70 aa18.46■□□□□ 0.55
PTPN4-207ENST00000460162 F8VVB4 439 aa18.45■□□□□ 0.54
PTPN4-207ENST00000460162 F8VWA3 439 aa18.45■□□□□ 0.54
PTPN4-207ENST00000460162 CHST1O43916 411 aa18.45■□□□□ 0.54
PTPN4-207ENST00000460162 ACTC1P68032 377 aa18.45■□□□□ 0.54
PTPN4-207ENST00000460162 ACTA1P68133 377 aa18.45■□□□□ 0.54
PTPN4-207ENST00000460162 ZNF85Q03923 595 aa18.45■□□□□ 0.54
PTPN4-207ENST00000460162 SLC25A26Q70HW3 274 aa18.45■□□□□ 0.54
PTPN4-207ENST00000460162 DNAAF1Q8NEP3 725 aa18.45■□□□□ 0.54
PTPN4-207ENST00000460162 EMG1Q92979 244 aaKnown RBP18.45■□□□□ 0.54
PTPN4-207ENST00000460162 CDCA4Q9BXL8 241 aa18.45■□□□□ 0.54
PTPN4-207ENST00000460162 SEBOXQ9HB31 216 aaPredicted RBP18.45■□□□□ 0.54
PTPN4-207ENST00000460162 SIGLEC9Q9Y336 463 aa18.45■□□□□ 0.54
PTPN4-207ENST00000460162 PRKDCP78527 4128 aaKnown RBP18.45■□□□□ 0.54
PTPN4-207ENST00000460162 CIB2O75838 187 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 ARG1P05089 322 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 IGHV1-8P0DP01 117 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 KIR3DL2P43630 455 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 RBP2P50120 134 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 MEF2CQ06413 473 aaPredicted RBP18.44■□□□□ 0.54
PTPN4-207ENST00000460162 TP53I3Q53FA7 332 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 ZNF626Q68DY1 528 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 TCF23Q7RTU1 214 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 LHFPL4Q7Z7J7 247 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 ENTHD1Q8IYW4 607 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 OR11H6Q8NGC7 330 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 PIFOQ8TCI5 191 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 TRUB1Q8WWH5 349 aaKnown RBP18.44■□□□□ 0.54
PTPN4-207ENST00000460162 SNX22Q96L94 193 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 ZNF714Q96N38 554 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 IMPAD1Q9NX62 359 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 TCF19Q9Y242 345 aa18.44■□□□□ 0.54
PTPN4-207ENST00000460162 SAC3D1A6NKF1 404 aa18.43■□□□□ 0.54
PTPN4-207ENST00000460162 HAND1O96004 215 aa18.43■□□□□ 0.54
PTPN4-207ENST00000460162 TMEM244Q5VVB8 128 aa18.43■□□□□ 0.54
PTPN4-207ENST00000460162 EGFL6Q8IUX8 553 aa18.43■□□□□ 0.54
PTPN4-207ENST00000460162 KLHDC1Q8N7A1 406 aa18.43■□□□□ 0.54
PTPN4-207ENST00000460162 TRBV2A0A0J9YWF9 115 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 hADV38S2A0JD32 116 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 TMEM82A0PJX8 343 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 MEGF11A6BM72 1044 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 CYB5AP00167 134 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 ATP1B3P54709 279 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 ZNF91Q05481 1191 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 EDDM3AQ14507 147 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 UTS2BQ765I0 119 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 OR2G2Q8NGZ5 317 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 FAM110DQ8TAY7 271 aaPredicted RBP18.42■□□□□ 0.54
PTPN4-207ENST00000460162 RPS4Y2Q8TD47 263 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 CFHR4Q92496 578 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 RNF166Q96A37 237 aaPredicted RBP18.42■□□□□ 0.54
PTPN4-207ENST00000460162 MALSU1Q96EH3 234 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 ADAT3Q96EY9 351 aaPredicted RBP18.42■□□□□ 0.54
PTPN4-207ENST00000460162 LINC00312Q9Y6C7 94 aa18.42■□□□□ 0.54
PTPN4-207ENST00000460162 ISG15P05161 165 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 PRKACBP22694 351 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 PEX2P28328 305 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 SPIN3Q5JUX0 258 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 FDX2Q6P4F2 183 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 LHFPL2Q6ZUX7 228 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 KCTD20Q7Z5Y7 419 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 DYNAPQ8N1N2 210 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 SPSB1Q96BD6 273 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 HRASLS5Q96KN8 279 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 ABCB10Q9NRK6 738 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 RBFOX1Q9NWB1 397 aaKnown RBP18.41■□□□□ 0.54
PTPN4-207ENST00000460162 PITPNC1Q9UKF7 332 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 FOXJ3Q9UPW0 622 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 ORC6Q9Y5N6 252 aa18.41■□□□□ 0.54
PTPN4-207ENST00000460162 IGKV1-9A0A0C4DH69 117 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 MEX3AA1L020 520 aaKnown RBP18.4■□□□□ 0.54
PTPN4-207ENST00000460162 INMTO95050 263 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms