RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 FNDC9Q8TBE3 224 aa15.73■□□□□ 0.11
HPS3-202ENST00000460120 KCNE4Q8WWG9 221 aa15.73■□□□□ 0.11
HPS3-202ENST00000460120 TSNAXQ99598 290 aaKnown RBP15.73■□□□□ 0.11
HPS3-202ENST00000460120 LDAHQ9H6V9 325 aa15.73■□□□□ 0.11
HPS3-202ENST00000460120 ZNF442Q9H7R0 627 aa15.73■□□□□ 0.11
HPS3-202ENST00000460120 NOSIPQ9Y314 301 aaKnown RBP15.73■□□□□ 0.11
HPS3-202ENST00000460120 LRP3O75074 770 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 ICAM2P13598 275 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 EDN3P14138 238 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 HOXA6P31267 233 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 GGNBP1Q5YKI7 109 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 SLC25A26Q70HW3 274 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 SPSB1Q96BD6 273 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 GPHA2Q96T91 129 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 C1orf123Q9NWV4 160 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 CRIM1Q9NZV1 1036 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 FOXJ2Q9P0K8 574 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 OR6C6A6NF89 314 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 XRCC2O43543 280 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 OR5AC1P0C628 307 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 FCGR2CP31995 323 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 OSR2Q8N2R0 312 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 PIGMQ9H3S5 423 aa15.72■□□□□ 0.11
HPS3-202ENST00000460120 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.72■□□□□ 0.11
HPS3-202ENST00000460120 F8VVB4 439 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 F8VWA3 439 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 ZXDAP98168 799 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 LHFPL5Q8TAF8 219 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 ADGRG7Q96K78 797 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 NKX6-2Q9C056 277 aaPredicted RBP15.71■□□□□ 0.11
HPS3-202ENST00000460120 SLC7A11Q9UPY5 501 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 TRBV6-7A0A0A0MS04 114 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 MRPL33O75394 65 aaKnown RBP15.71■□□□□ 0.11
HPS3-202ENST00000460120 ZNF728P0DKX0 622 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 ZNF708P17019 499 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 ADCYAP1P18509 176 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 DUSP1P28562 367 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 VASH2Q86V25 355 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 TUSC5Q8IXB3 177 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 RNF141Q8WVD5 230 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 PAPOLGQ9BWT3 736 aaKnown RBP15.71■□□□□ 0.11
HPS3-202ENST00000460120 SLC7A10Q9NS82 523 aa15.71■□□□□ 0.11
HPS3-202ENST00000460120 FREM1Q5H8C1 2179 aa15.71■□□□□ 0.1
HPS3-202ENST00000460120 PCSK5Q92824 1860 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 DNASE2O00115 360 aaPredicted RBP15.7■□□□□ 0.1
HPS3-202ENST00000460120 CHATP28329 748 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 ARF1P84077 181 aaKnown RBP15.7■□□□□ 0.1
HPS3-202ENST00000460120 CCDC36Q8IYA8 594 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 DEFB123Q8N688 67 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 SLC30A7Q8NEW0 376 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 PSMF1Q92530 271 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 SLC5A7Q9GZV3 580 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 NECAP2Q9NVZ3 263 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 TNRC6BQ9UPQ9 1833 aaKnown RBP15.7■□□□□ 0.1
HPS3-202ENST00000460120 hCG_38984A0A1B0GV85 526 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 F8W036 122 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 ITGA3P26006 1051 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 BLOC1S1P78537 153 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 SPEM2Q0P670 501 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 PDZK1IP1Q13113 114 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 IGFBP7Q16270 282 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 ABLIM2Q6H8Q1 611 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 MEX3BQ6ZN04 569 aaKnown RBP15.7■□□□□ 0.1
HPS3-202ENST00000460120 LHFPL2Q6ZUX7 228 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 LYZL2Q7Z4W2 148 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 ZNF611Q8N823 705 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 STOML3Q8TAV4 291 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 HS3ST6Q96QI5 342 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 DNTTIP1Q9H147 329 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 TAF9BQ9HBM6 251 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 IL36RNQ9UBH0 155 aa15.7■□□□□ 0.1
HPS3-202ENST00000460120 C5orf49A4QMS7 147 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 SLC33A1O00400 549 aaPredicted RBP15.69■□□□□ 0.1
HPS3-202ENST00000460120 MED6O75586 246 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 FARS2O95363 451 aaKnown RBP15.69■□□□□ 0.1
HPS3-202ENST00000460120 HKR1P10072 659 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 CD79AP11912 226 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 MAGEA5P43359 124 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 AKIRIN2Q53H80 203 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 RTN4IP1Q8WWV3 396 aaPredicted RBP15.69■□□□□ 0.1
HPS3-202ENST00000460120 SLAMF9Q96A28 289 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 BSCL2Q96G97 398 aaPredicted RBP15.69■□□□□ 0.1
HPS3-202ENST00000460120 MEMO1Q9Y316 297 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 MED19A0JLT2 244 aaPredicted RBP15.69■□□□□ 0.1
HPS3-202ENST00000460120 TMEM218A2RU14 115 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 K7EPK0 472 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 SERPINA7P05543 415 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 RPL12P30050 165 aaKnown RBP15.69■□□□□ 0.1
HPS3-202ENST00000460120 ASCL1P50553 236 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 SSPNQ14714 243 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 FAM71E2Q8N5Q1 922 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 OR4A4PQ8NGN8 299 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 NTNG2Q96CW9 530 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 C10orf35Q96D05 121 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 PRRG4Q9BZD6 226 aa15.69■□□□□ 0.1
HPS3-202ENST00000460120 CRYM-AS1A6NIL9 109 aa15.68■□□□□ 0.1
HPS3-202ENST00000460120 IFNA21P01568 189 aa15.68■□□□□ 0.1
HPS3-202ENST00000460120 PET100P0DJ07 73 aa15.68■□□□□ 0.1
HPS3-202ENST00000460120 FOXO1Q12778 655 aa15.68■□□□□ 0.1
HPS3-202ENST00000460120 IGSF11Q5DX21 431 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms