RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ADRA2CP18825 462 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 ZNF93P35789 620 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-215ENST00000457039 NPY4RP50391 375 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 PAX2Q02962 417 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 NEDD8Q15843 81 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 ESCO2Q56NI9 601 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 WDR25Q64LD2 544 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-215ENST00000457039 FAM166AQ6J272 317 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 ASCL4Q6XD76 172 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 Q71RC1 249 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-215ENST00000457039 C1QL2Q7Z5L3 287 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 SATL1Q86VE3 508 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 CDH26Q8IXH8 852 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 FAM216BQ8N7L0 139 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 MUL1Q969V5 352 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 DACT3Q96B18 629 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-215ENST00000457039 TMEM186Q96B77 213 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 SDSLQ96GA7 329 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 NR1H4Q96RI1 486 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-215ENST00000457039 NKX3-1Q99801 234 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-215ENST00000457039 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-215ENST00000457039 LPAR2Q9HBW0 351 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 RBFOX1Q9NWB1 397 aaKnown RBP11.75□□□□□ -0.53
SMPD4-215ENST00000457039 MAB21L2Q9Y586 359 aa11.75□□□□□ -0.53
SMPD4-215ENST00000457039 NSD1Q96L73 2696 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-215ENST00000457039 TRAV20A0A0B4J274 112 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 PPIAL4CA0A0B4J2A2 164 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 TRDV1A0A1B0GX56 115 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 RFPL4AA6NLU0 287 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 RFPL4AL1F8VTS6 287 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 TRAPPC2LH3BP13 241 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 SIGLEC5O15389 551 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 CYB5AP00167 134 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 KNG1P01042 644 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 SFTPBP07988 381 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 TMEM225BP0DP42 221 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 CD37P11049 281 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 SELLP14151 372 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 SRMP19623 302 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 GALP22466 123 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 PTGFRP43088 359 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 OR3A4PP47883 348 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 GNB2P62879 340 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 LCN2P80188 198 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 DGUOKQ16854 277 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 HSD17B12Q53GQ0 312 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 SLC36A1Q7Z2H8 476 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 GLCCI1Q86VQ1 547 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 FAM58AQ8N1B3 248 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 FGFRL1Q8N441 504 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 NKAIN3Q8N8D7 197 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 Q8NFD4 153 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 TNFAIP8L1Q8WVP5 186 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 GPER1Q99527 375 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 SEBOXQ9HB31 216 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-215ENST00000457039 RHOFQ9HBH0 211 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 YAE1D1Q9NRH1 226 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 HIF1ANQ9NWT6 349 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 IL36RNQ9UBH0 155 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 CLN8Q9UBY8 286 aa11.74□□□□□ -0.53
SMPD4-215ENST00000457039 MEGF11A6BM72 1044 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 NKX6-3A6NJ46 265 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 A8MV72 311 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-215ENST00000457039 DVL1O14640 695 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 SMIM18P0DKX4 95 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 PRDX2P32119 198 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 ZNF146Q15072 292 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 ELP2Q6IA86 826 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 EMG1Q92979 244 aaKnown RBP11.73□□□□□ -0.53
SMPD4-215ENST00000457039 CNTD2Q9H8S5 307 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 TCF7L1Q9HCS4 588 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 HMG20AQ9NP66 347 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 MMP26Q9NRE1 261 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 IL36GQ9NZH8 169 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 METRNQ9UJH8 293 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 KCNS2Q9ULS6 477 aa11.73□□□□□ -0.53
SMPD4-215ENST00000457039 C22orf46C9J442 243 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 ARL6IP5O75915 188 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 CALCBP10092 127 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 JUNBP17275 347 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-215ENST00000457039 GABRA2P47869 451 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 CEBPDP49716 269 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-215ENST00000457039 IL13RA1P78552 427 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 C11orf91Q3C1V1 193 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 SPIN3Q5JUX0 258 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 PNLDC1Q8NA58 520 aaKnown RBP11.72□□□□□ -0.53
SMPD4-215ENST00000457039 ZNRF1Q8ND25 227 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 MED30Q96HR3 178 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 C1orf147Q96MC9 270 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-215ENST00000457039 GFI1Q99684 422 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 UQCC2Q9BRT2 126 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 FAM192AQ9GZU8 254 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 OR14J1Q9UGF5 321 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 STUB1Q9UNE7 303 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 HIVEP2P31629 2446 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 ARHGAP32A7KAX9 2087 aa11.72□□□□□ -0.53
SMPD4-215ENST00000457039 IGHV2-70DA0A0C4DH43 119 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 SHISA3A0PJX4 238 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms