RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RND2P52198 227 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 CLDN6P56747 220 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ROM1Q03395 351 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 EXT1Q16394 746 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ARHGEF39Q8N4T4 335 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 KREMEN2Q8NCW0 462 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 LIN37Q96GY3 246 aaPredicted RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 GPX7Q96SL4 187 aaPredicted RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 KCNJ16Q9NPI9 418 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 MED29Q9NX70 200 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 TAS2R8Q9NYW2 309 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF207O43670 478 aaKnown RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 SLC16A7O60669 478 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 TACR3P29371 465 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 IL12BP29460 328 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ACTC1P68032 377 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ACTA1P68133 377 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 FZD2Q14332 565 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 FNDC7Q5VTL7 733 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 OR2M3Q8NG83 312 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 NPRL2Q8WTW4 380 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 AIF1LQ9BQI0 150 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 RSG1Q9BU20 258 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 NMES1Q9C002 83 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 DNAJC4Q9NNZ3 241 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ASCL3Q9NQ33 180 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 B3GAT1Q9P2W7 334 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 GTF2A1LQ9UNN4 478 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 KPTNQ9Y664 436 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 VWFP04275 2813 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 GCN1Q92616 2671 aaKnown RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 RBFOX2O43251 390 aaKnown RBP eCLIP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 CEACAM5P06731 702 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 CST5P28325 142 aaPredicted RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 CD1BP29016 333 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 VIPR2P41587 438 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 GPR3P46089 330 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 RAB28P51157 221 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ZP2Q05996 745 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ACKR1Q16570 336 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 HIKESHIQ53FT3 197 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 TPTE2P1Q5T6R2 138 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 FDX2Q6P4F2 183 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 DEGS2Q6QHC5 323 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 TCF23Q7RTU1 214 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 SLC16A9Q7RTY1 509 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ATG4DQ86TL0 474 aaPredicted RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 HAPLN4Q86UW8 402 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF679Q8IYX0 411 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 RPP25LQ8N5L8 163 aaKnown RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 CHST4Q8NCG5 386 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 EDAQ92838 391 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM210BQ96KR6 192 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 KXD1Q9BQD3 176 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 VN1R1Q9GZP7 353 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 OR51B6Q9H340 312 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 GP6Q9HCN6 339 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 RXFP3Q9NSD7 469 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 PPP1R14DQ9NXH3 145 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 RNF186Q9NXI6 227 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ERRFI1Q9UJM3 462 aaPredicted RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 LAMP5Q9UJQ1 280 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 WSB1Q9Y6I7 421 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 GRIFINA4D1Z8 144 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF587BE7ETH6 402 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 CDC40O60508 579 aaKnown RBP eCLIP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 VAMP5O95183 116 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 CHATP28329 748 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 TAGLN2P37802 199 aaKnown RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 GLIPR1P48060 266 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 CD81P60033 236 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 RAB4BP61018 213 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ACTA2P62736 377 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ACTG2P63267 376 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 GPR18Q14330 331 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 IGFBP7Q16270 282 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 LPCAT3Q6P1A2 487 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 RNF44Q7L0R7 432 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 C6orf201Q7Z4U5 140 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 GBGT1Q8N5D6 347 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 NECAP1Q8NC96 275 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 C16orf52Q8NHV5 167 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM3CQ92520 227 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 GAL3ST3Q96A11 431 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 SHDQ96IW2 340 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 TP53RKQ96S44 253 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 PHB2Q99623 299 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 HDAC8Q9BY41 377 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 OPA3Q9H6K4 179 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 COMMD9Q9P000 198 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 KCNIP3Q9Y2W7 256 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 ACACBO00763 2458 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 B4E171 279 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 SHISA8B8ZZ34 492 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 DEDDO75618 318 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 SFT2D2O95562 160 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 IGHEP01854 428 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 OPN1LWP04000 364 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 EPCAMP16422 314 aa3.93□□□□□ -1.78
DEPDC1-202ENST00000456315 RABIFP47224 123 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms