RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 FRRS1LQ9P0K9 344 aa14.61□□□□□ -0.07
MSH6-207ENST00000456246 IGKV1-27A0A075B6S5 117 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 CLPSL1A2RUU4 121 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 ANGPTL7O43827 346 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 OCM2P0CE71 109 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 OCMP0CE72 109 aaPredicted RBP14.6□□□□□ -0.07
MSH6-207ENST00000456246 CEBPDP49716 269 aaPredicted RBP14.6□□□□□ -0.07
MSH6-207ENST00000456246 RELBQ01201 579 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 RAB40BQ12829 278 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 GALEQ14376 348 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 TMEM200BQ69YZ2 307 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 SLC25A26Q70HW3 274 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 RDH10Q8IZV5 341 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 ASCC1Q8N9N2 400 aaKnown RBP14.6□□□□□ -0.07
MSH6-207ENST00000456246 BEND2Q8NDZ0 799 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 RHOXF1Q8NHV9 184 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 ADAT3Q96EY9 351 aaPredicted RBP14.6□□□□□ -0.07
MSH6-207ENST00000456246 PELI1Q96FA3 418 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 C4orf36Q96KX1 117 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 MTCH1Q9NZJ7 389 aa14.6□□□□□ -0.07
MSH6-207ENST00000456246 LOC100130705A0A1B0GUX0 176 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 J3QLW9 94 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 IGHA1P01876 353 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 RBP4P02753 201 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 ZNF19P17023 458 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 ATF1P18846 271 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 AZGP1P25311 298 aaKnown RBP14.59□□□□□ -0.07
MSH6-207ENST00000456246 ERVFRD-1P60508 538 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 COL10A1Q03692 680 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 ALKBH1Q13686 389 aaKnown RBP14.59□□□□□ -0.07
MSH6-207ENST00000456246 TAF9Q16594 264 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 AANATQ16613 207 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 ZSCAN26Q16670 478 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 GDPD3Q7L5L3 318 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 WFDC12Q8WWY7 111 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 EMG1Q92979 244 aaKnown RBP14.59□□□□□ -0.07
MSH6-207ENST00000456246 STMN2Q93045 179 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 SLAMF9Q96A28 289 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 ALG8Q9BVK2 526 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 GLS2Q9UI32 602 aa14.59□□□□□ -0.07
MSH6-207ENST00000456246 RPL36Q9Y3U8 105 aaKnown RBP14.59□□□□□ -0.07
MSH6-207ENST00000456246 TRBV2A0A0J9YWF9 115 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 A0A1W2PRD5 423 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 A0A1W2PRF3 423 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 A0A1W2PRM7 423 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 ZNF737O75373 536 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 MT-ND2P03891 347 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 TGFBR2P37173 567 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 DLX1P56177 255 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 MTCP1P56278 107 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 NANOS3P60323 173 aaKnown RBP14.58□□□□□ -0.08
MSH6-207ENST00000456246 PRB3Q04118 309 aaPredicted RBP14.58□□□□□ -0.08
MSH6-207ENST00000456246 MEF2CQ06413 473 aaPredicted RBP14.58□□□□□ -0.08
MSH6-207ENST00000456246 DHRS7BQ6IAN0 325 aaPredicted RBP14.58□□□□□ -0.08
MSH6-207ENST00000456246 HCP5Q6MZN7 132 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 OR8H2Q8N162 312 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 BATF2Q8N1L9 274 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 ZNF676Q8N7Q3 588 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 OR4M1Q8NGD0 313 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 OR13C3Q8NGS6 347 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 TAF15Q92804 592 aaKnown RBP eCLIP14.58□□□□□ -0.08
MSH6-207ENST00000456246 FGGYQ96C11 551 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 SNX22Q96L94 193 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 OPALINQ96PE5 141 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 SLC29A1Q99808 456 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 RHOFQ9HBH0 211 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 MRPS18AQ9NVS2 196 aaKnown RBP14.58□□□□□ -0.08
MSH6-207ENST00000456246 FAM118AQ9NWS6 357 aa14.58□□□□□ -0.08
MSH6-207ENST00000456246 IGKV1-9A0A0C4DH69 117 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 TMEM212A6NML5 194 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 OR4C45A6NMZ5 311 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 CCDC159P0C7I6 412 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 POU3F4P49335 361 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 KLHL22Q53GT1 634 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 SPIN3Q5JUX0 258 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 PNKDQ8N490 385 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 ZSCAN4Q8NAM6 433 aaPredicted RBP14.57□□□□□ -0.08
MSH6-207ENST00000456246 ZNF555Q8NEP9 628 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 PPP1R35Q8TAP8 253 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 COMMD4Q9H0A8 199 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 MEGF9Q9H1U4 602 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 C8orf4Q9NR00 106 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 SMPD3Q9NY59 655 aaPredicted RBP14.57□□□□□ -0.08
MSH6-207ENST00000456246 RNF114Q9Y508 228 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 PCDHGB5Q9Y5G0 923 aa14.57□□□□□ -0.08
MSH6-207ENST00000456246 C17orf98A8MV24 154 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 F8VVB4 439 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 F8VWA3 439 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 HAND1O96004 215 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 CCL3L1P16619 93 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 PEX2P28328 305 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 LGALS4P56470 323 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 EDDM3BP56851 147 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 ZNF273Q14593 569 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 ZNF146Q15072 292 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 LPCAT4Q643R3 524 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 LHFPL3Q86UP9 236 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 FAM58AQ8N1B3 248 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 C11orf42Q8N5U0 333 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 LINC01006Q8NI28 216 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms