RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CR1P17927 2039 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 IGKV1D-17A0A075B6S4 117 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 TRAV20A0A0B4J274 112 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 IGKV1-12A0A0C4DH73 117 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 TRIM64CA6NLI5 447 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 F8VVB4 439 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 F8VWA3 439 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 DVL1O14640 695 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 IGKV1D-12P01611 117 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 CSTBP04080 98 aaKnown RBP12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 CHRM2P08172 466 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 CD36P16671 472 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 ZNF16P17020 682 aaPredicted RBP12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 PRKACAP17612 351 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 MYL9P24844 172 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 OR3A4PP47883 348 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 DVL1P1P54792 670 aaPredicted RBP12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 SEC61A1P61619 476 aaKnown RBP12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 IL13RA1P78552 427 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 GPR176Q14439 515 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 LRRC10Q5BKY1 277 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 CD276Q5ZPR3 534 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 WDR25Q64LD2 544 aaPredicted RBP12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 ASCL4Q6XD76 172 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 ZNF841Q6ZN19 808 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 C1QL2Q7Z5L3 287 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 LRRTM1Q86UE6 522 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 ZNF561Q8N587 486 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 UQCC2Q9BRT2 126 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 CNTD2Q9H8S5 307 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 HMG20AQ9NP66 347 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 RBFOX1Q9NWB1 397 aaKnown RBP12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 CTSZQ9UBR2 303 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 KCNS2Q9ULS6 477 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 CSMD1Q96PZ7 3565 aa12.17□□□□□ -0.46
NCKIPSD-207ENST00000453349 A8MXK9 166 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 PDCD5O14737 125 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 SH2D1BO14796 132 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 GPR37O15354 613 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 SIGLEC5O15389 551 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 PHF1O43189 567 aaPredicted RBP12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 ZNF780AO75290 641 aaPredicted RBP12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 CDRT1O95170 752 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 HTR3BO95264 441 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 SFTPBP07988 381 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 CALCBP10092 127 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 FGF9P31371 208 aaPredicted RBP12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 RANBP1P43487 201 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 MTNR1BP49286 362 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 PSMD7P51665 324 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 KRTAP1-1Q07627 177 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 IKZF1Q13422 519 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 SPIN3Q5JUX0 258 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 C22orf42Q6IC83 251 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 CD177Q8N6Q3 437 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 TMEM186Q96B77 213 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 SDSLQ96GA7 329 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 GAFA1Q96PS6 74 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 NKX3-1Q99801 234 aaPredicted RBP12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 MRPS26Q9BYN8 205 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 SEBOXQ9HB31 216 aaPredicted RBP12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 HIF1ANQ9NWT6 349 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 OR5V1Q9UGF6 321 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 MRPS28Q9Y2Q9 187 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 POLR3KQ9Y2Y1 108 aaPredicted RBP12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 TEX15Q9BXT5 2789 aa12.16□□□□□ -0.46
NCKIPSD-207ENST00000453349 LOC105371242A0A075B767 164 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 TRAV1-2A0A0B4J238 106 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 A8MV72 311 aaPredicted RBP12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 ECDO95905 644 aaPredicted RBP12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 TFF1P04155 84 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 ADRA2CP18825 462 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 AMY2BP19961 511 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 CAPZA1P52907 286 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 SNU13P55769 128 aaKnown RBP12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 FGF12P61328 243 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 ZNF146Q15072 292 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 C11orf91Q3C1V1 193 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 AWAT2Q6E213 333 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 ELP2Q6IA86 826 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 GLIPR1L1Q6UWM5 242 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 Q71RC1 249 aaPredicted RBP12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 FAM216BQ8N7L0 139 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 ZNRF1Q8ND25 227 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 ST8SIA4Q92187 359 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 OR51E2Q9H255 320 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 TXNL4BQ9NX01 149 aaKnown RBP12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 IL36GQ9NZH8 169 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 GHRLQ9UBU3 117 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 SLC25A10Q9UBX3 287 aaPredicted RBP12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 ZNF222Q9UK12 451 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 AK6Q9Y3D8 172 aaKnown RBP12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 NOTCH2Q04721 2471 aa12.15□□□□□ -0.46
NCKIPSD-207ENST00000453349 PPIAL4CA0A0B4J2A2 164 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 KIAA1324LA8MWY0 1029 aaPredicted RBP12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 HAND1O96004 215 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 NDUFB7P17568 137 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 GATA3P23771 443 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 CEBPDP49716 269 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms