RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 SLC38A11Q08AI6 406 aa6.85□□□□□ -1.31
RIF1-206ENST00000453091 ZNF141Q15928 474 aa6.85□□□□□ -1.31
RIF1-206ENST00000453091 AARDQ4LEZ3 155 aa6.85□□□□□ -1.31
RIF1-206ENST00000453091 RNASEKQ6P5S7 137 aaKnown RBP6.85□□□□□ -1.31
RIF1-206ENST00000453091 DECR2Q9NUI1 292 aa6.85□□□□□ -1.31
RIF1-206ENST00000453091 SSUH2Q9Y2M2 353 aa6.85□□□□□ -1.31
RIF1-206ENST00000453091 ZBTB25P24278 435 aa6.85□□□□□ -1.31
RIF1-206ENST00000453091 CCR5P51681 352 aa6.85□□□□□ -1.31
RIF1-206ENST00000453091 Q3ZCU0 254 aa6.85□□□□□ -1.31
RIF1-206ENST00000453091 TBC1D26Q86UD7 250 aa6.85□□□□□ -1.31
RIF1-206ENST00000453091 PTPMT1Q8WUK0 201 aaPredicted RBP6.85□□□□□ -1.31
RIF1-206ENST00000453091 NMES1Q9C002 83 aa6.85□□□□□ -1.31
RIF1-206ENST00000453091 ZNF71Q9NQZ8 489 aaPredicted RBP6.85□□□□□ -1.31
RIF1-206ENST00000453091 ZNF737O75373 536 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 BGLAPP02818 100 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 CALCRP30988 508 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 NHLH2Q02577 135 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 C2orf68Q2NKX9 166 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 ZNF660Q6AZW8 331 aaPredicted RBP6.84□□□□□ -1.31
RIF1-206ENST00000453091 OR2C3Q8N628 320 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 PHIPQ8WWQ0 1821 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 ASB5Q8WWX0 329 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 CLDN23Q96B33 292 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 CD63P08962 238 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 ARRDC1Q8N5I2 433 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 OR2V1Q8NHB1 315 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 SF3B6Q9Y3B4 125 aaKnown RBP6.84□□□□□ -1.31
RIF1-206ENST00000453091 CDK2AP1O14519 115 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 COX5AP20674 150 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 FUT3P21217 361 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 HLA-DRB3P79483 266 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 CLN3Q13286 438 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 PNLIPRP3Q17RR3 467 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 UQCC3Q6UW78 93 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 RABEPKQ7Z6M1 372 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 SPACA9Q96E40 222 aaPredicted RBP6.84□□□□□ -1.31
RIF1-206ENST00000453091 ZNF391Q9UJN7 358 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 ATP23Q9Y6H3 246 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 HMSDA8MTL9 139 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 NAT2P11245 290 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 ZP1P60852 638 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 HIST1H3AP68431 136 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 CYB5R2Q6BCY4 276 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 SPNS3Q6ZMD2 512 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 GAPTQ8N292 157 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 MRGPRDQ8TDS7 321 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 TMEM18Q96B42 140 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 FER1L6-AS2Q96M78 137 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 SOX7Q9BT81 388 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 ZFP64Q9NPA5 681 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 CES1P1Q9UKY3 287 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 ACOT6Q3I5F7 207 aaPredicted RBP6.84□□□□□ -1.31
RIF1-206ENST00000453091 APCDD1LQ8NCL9 501 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 LPAR3Q9UBY5 353 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 A0A1W2PPE3 182 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 MFSD2BA6NFX1 497 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 TERTO14746 1132 aaKnown RBP6.84□□□□□ -1.31
RIF1-206ENST00000453091 CHST1O43916 411 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 FUT6P51993 359 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 OR1C1Q15619 314 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 CMTM3Q96MX0 182 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 ABHD14AQ9BUJ0 271 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 PPP1R14DQ9NXH3 145 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 TNFSF18Q9UNG2 199 aa6.84□□□□□ -1.31
RIF1-206ENST00000453091 RBFOX3A6NFN3 312 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 ZNF98A6NK75 572 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 SERPINE3A8MV23 424 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 DUS4LO95620 317 aaKnown RBP6.84□□□□□ -1.32
RIF1-206ENST00000453091 MBP02144 154 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 DEFA4P12838 97 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 HOXC8P31273 242 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 ACAA2P42765 397 aaKnown RBP6.84□□□□□ -1.32
RIF1-206ENST00000453091 LIMS1P48059 325 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 C21orf58P58505 322 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 SUMO1P63165 101 aaKnown RBP6.84□□□□□ -1.32
RIF1-206ENST00000453091 ZNF273Q14593 569 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 EXT1Q16394 746 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 PIK3IP1Q96FE7 263 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 PGLYRP3Q96LB9 341 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 ELOVL1Q9BW60 279 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 RASL12Q9NYN1 266 aa6.84□□□□□ -1.32
RIF1-206ENST00000453091 MYH4Q9Y623 1939 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 TRGV8A0A0C4DH27 118 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 CTDSPLO15194 276 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 CT45A8P0DMV1 189 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 CT45A9P0DMV2 189 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 H2BFSP57053 126 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 ERVFC1-1P60608 527 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 SKP2Q13309 424 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 CT45A2Q5DJT8 189 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 SKA3Q8IX90 412 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 OR13G1Q8NGZ3 307 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 VSTM2LQ96N03 204 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 CDX2Q99626 313 aaPredicted RBP6.83□□□□□ -1.32
RIF1-206ENST00000453091 RARRES2Q99969 163 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 LRFN3Q9BTN0 628 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 SLC35B3Q9H1N7 401 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 WDR13Q9H1Z4 485 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 RIMS4Q9H426 269 aaPredicted RBP6.83□□□□□ -1.32
RIF1-206ENST00000453091 MTCH2Q9Y6C9 303 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms