RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 C17orf78Q8N4C9 275 aa13.84□□□□□ -0.19
CHRD-205ENST00000448472 CDCA3Q99618 268 aaPredicted RBP13.84□□□□□ -0.19
CHRD-205ENST00000448472 SLC2A9Q9NRM0 540 aa13.84□□□□□ -0.19
CHRD-205ENST00000448472 CRYM-AS1A6NIL9 109 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 H3BP45 60 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 TRAF3IP2O43734 574 aaPredicted RBP13.83□□□□□ -0.2
CHRD-205ENST00000448472 LYL1P12980 280 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 AGAP20933 346 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 PIGYQ3MUY2 71 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 FBXL14Q8N1E6 418 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 OXGR1Q96P68 337 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 MRPL13Q9BYD1 178 aaKnown RBP13.83□□□□□ -0.2
CHRD-205ENST00000448472 ULBP2Q9BZM5 246 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 CYB5BO43169 146 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 HSPA12AO43301 675 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 SEC11BP0C7V7 166 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 P2RY1P47900 373 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 SURF2Q15527 256 aaPredicted RBP13.83□□□□□ -0.2
CHRD-205ENST00000448472 PIGCQ92535 297 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 MRGPRX4Q96LA9 322 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 RNF122Q9H9V4 155 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 FBLN5Q9UBX5 448 aa13.83□□□□□ -0.2
CHRD-205ENST00000448472 IGHV1OR21-1A0A087WYE8 117 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 H0YL77 283 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 GEMIN2O14893 280 aaKnown RBP13.82□□□□□ -0.2
CHRD-205ENST00000448472 ZNHIT1O43257 154 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 FOLR2P14207 255 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 OR2B11Q5JQS5 317 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 AKR1C8PQ5T2L2 129 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 TMEM123Q8N131 208 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 NUDT16L1Q9BRJ7 211 aaKnown RBP13.82□□□□□ -0.2
CHRD-205ENST00000448472 GGACTQ9BVM4 153 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 PAPOLGQ9BWT3 736 aaKnown RBP13.82□□□□□ -0.2
CHRD-205ENST00000448472 STARD10Q9Y365 291 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 ZNF84P51523 738 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 NKX6-1P78426 367 aaPredicted RBP13.82□□□□□ -0.2
CHRD-205ENST00000448472 CCL20P78556 96 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 TLE1Q04724 770 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 NKAIN1Q4KMZ8 207 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 OR5L2Q8NGL0 311 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 OR14L1PQ8NHC6 308 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 MR1Q95460 341 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 SPTSSAQ969W0 71 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 LYZL4Q96KX0 146 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 C8orf33Q9H7E9 229 aaPredicted RBP13.82□□□□□ -0.2
CHRD-205ENST00000448472 SPINK2P20155 84 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 NKX2-1P43699 371 aaPredicted RBP13.82□□□□□ -0.2
CHRD-205ENST00000448472 ZNF133P52736 654 aaPredicted RBP13.82□□□□□ -0.2
CHRD-205ENST00000448472 RUNX1Q01196 453 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 HGFACQ04756 655 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 HAS2Q92819 552 aa13.82□□□□□ -0.2
CHRD-205ENST00000448472 THBS4P35443 961 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 RPS18P62269 152 aaKnown RBP13.81□□□□□ -0.2
CHRD-205ENST00000448472 PLPPR5Q32ZL2 321 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 FBXO46Q6PJ61 603 aaPredicted RBP13.81□□□□□ -0.2
CHRD-205ENST00000448472 ZNF385AQ96PM9 386 aaKnown RBP13.81□□□□□ -0.2
CHRD-205ENST00000448472 OR6C1Q96RD1 312 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 GAR1Q9NY12 217 aaKnown RBP13.81□□□□□ -0.2
CHRD-205ENST00000448472 H3BQ15 152 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 IL15RAQ13261 267 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 SLC35G3Q8N808 338 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 RHOVQ96L33 236 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 GNRHR2Q96P88 292 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 UCN2Q96RP3 112 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 ZNF286AQ9HBT8 521 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 ST3GAL6Q9Y274 331 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 STRAPQ9Y3F4 350 aaKnown RBP13.81□□□□□ -0.2
CHRD-205ENST00000448472 LMO7DNF2Z398 122 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 ECI1P42126 302 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 RPS23P62266 143 aaKnown RBP13.81□□□□□ -0.2
CHRD-205ENST00000448472 RPL23AP62750 156 aaKnown RBP13.81□□□□□ -0.2
CHRD-205ENST00000448472 SNAI3Q3KNW1 292 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 NSUN5P2Q63ZY6 315 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 SLC25A47Q6Q0C1 308 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 ZNF383Q8NA42 475 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 OR6X1Q8NH79 312 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 PP6455Q8WZ26 134 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 LIME1Q9H400 295 aa13.81□□□□□ -0.2
CHRD-205ENST00000448472 NKX2-6A6NCS4 301 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 RBFOX3A6NFN3 312 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 ZFP92A6NM28 416 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 ZFAND5O76080 213 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 TUBG1P23258 451 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 ATP6V0CP27449 155 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 EWSR1Q01844 656 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHRD-205ENST00000448472 LIAT1Q6ZQX7 453 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 ANKRD37Q7Z713 158 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 OR2C3Q8N628 320 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 COMMD1Q8N668 190 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 OR5C1Q8NGR4 320 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 RAB39BQ96DA2 213 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 NIPSNAP3BQ9BS92 247 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 TGIF2Q9GZN2 237 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 PRO1933Q9H354 126 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 CLEC1BQ9P126 229 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 CCDC187A0A096LP49 1063 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 CEACAM18A8MTB9 384 aa13.8□□□□□ -0.2
CHRD-205ENST00000448472 MDKP21741 143 aaPredicted RBP13.8□□□□□ -0.2
CHRD-205ENST00000448472 RTL6Q6ICC9 239 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms