RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 RAC1P63000 192 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 ARG2P78540 354 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 EXOSC7Q15024 291 aaKnown RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 SMAD2Q15796 467 aaKnown RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 OR2C3Q8N628 320 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 TLNRD1Q9H1K6 362 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 VDAC3Q9Y277 283 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 TMEM184BQ9Y519 407 aaPredicted RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 CASP8AP2Q9UKL3 1982 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 EPHA8P29322 1005 aaPredicted RBP8.25□□□□□ -1.09
SMC6-207ENST00000448223 IL24Q13007 206 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 IL13RA2Q14627 380 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 FAM69BQ5VUD6 431 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 TMEM116Q8NCL8 245 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 OR10AD1Q8NGE0 317 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 TSACCQ96A04 125 aaPredicted RBP8.25□□□□□ -1.09
SMC6-207ENST00000448223 OR51B6Q9H340 312 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 TRBV11-1A0A0K0K1C0 115 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 A6NJY4 79 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 MBPP02686 304 aaPredicted RBP8.25□□□□□ -1.09
SMC6-207ENST00000448223 KLK3P07288 261 aaPredicted RBP8.25□□□□□ -1.09
SMC6-207ENST00000448223 RIPPLY3P57055 190 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 ZNF345Q14585 488 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 C1orf185Q5T7R7 199 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 PARM1Q6UWI2 310 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 RNF165Q6ZSG1 346 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 UTP23Q9BRU9 249 aaKnown RBP8.25□□□□□ -1.09
SMC6-207ENST00000448223 MENTQ9BUN1 341 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 NUDT3O95989 172 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 ADRA2AP08913 450 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 NMUP48645 174 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 CDKN3Q16667 212 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 ZNF506Q5JVG8 444 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 ERGIC1Q969X5 290 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 PIK3IP1Q96FE7 263 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 PDXPQ96GD0 296 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 C5orf42Q9H799 3197 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 ANKRD20A5PA0PJZ0 165 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 CRYM-AS1A6NIL9 109 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 SERPINE3A8MV23 424 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 FOXE1O00358 373 aaPredicted RBP8.25□□□□□ -1.09
SMC6-207ENST00000448223 PGA3P0DJD8 388 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 BTF3P20290 206 aaKnown RBP8.25□□□□□ -1.09
SMC6-207ENST00000448223 ACSM6Q6P461 480 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 CLEC18BQ6UXF7 455 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 Q6ZNB5 142 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 OR52N4Q8NGI2 321 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 Q96M85 177 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 INSM2Q96T92 566 aaPredicted RBP8.25□□□□□ -1.09
SMC6-207ENST00000448223 MANBALQ9NQG1 85 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 TINAGQ9UJW2 476 aa8.25□□□□□ -1.09
SMC6-207ENST00000448223 TMEM265A0A087WTH1 108 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 TSPAN13O95857 204 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 BCL3P20749 454 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 F2RP25116 425 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 CST5P28325 142 aaPredicted RBP8.24□□□□□ -1.09
SMC6-207ENST00000448223 TCL1AP56279 114 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 R3HDM4Q96D70 268 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 C6orf106Q9H6K1 298 aaPredicted RBP8.24□□□□□ -1.09
SMC6-207ENST00000448223 FTSJ1Q9UET6 329 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 ZNF732B4DXR9 585 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 HTR5AP47898 357 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 MZT1Q08AG7 82 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 C1orf61Q13536 156 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 OR1C1Q15619 314 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 LDLRAD2Q5SZI1 272 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 LHX8Q68G74 356 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 SLC35E4Q6ICL7 350 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 FDX2Q6P4F2 183 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 OR6C1Q96RD1 312 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 ULBP2Q9BZM5 246 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 KCNK15Q9H427 330 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 ZMIZ1Q9ULJ6 1067 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 MED12Q93074 2177 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 C7orf66A4D0T2 115 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 NDUFS6O75380 124 aaKnown RBP8.24□□□□□ -1.09
SMC6-207ENST00000448223 VAMP5O95183 116 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 ADH4P08319 380 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 MELTFP08582 738 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 CCL5P13501 91 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 CXCL2P19875 107 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 FIGLAQ6QHK4 219 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 SPRED2Q7Z698 418 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 DMRTA2Q96SC8 542 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 RNF2Q99496 336 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 MS4A8Q9BY19 250 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 SLC25A22Q9H936 323 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 CALHM2Q9HA72 323 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 PATJQ8NI35 1801 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 CHD5Q8TDI0 1954 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 OOEPA6NGQ2 149 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 SLC17A2O00624 439 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 APCSP02743 223 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 GCSHP23434 173 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 HERVK_113P61574 105 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 GABREP78334 506 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 NR0B2Q15466 257 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 PNLIPRP3Q17RR3 467 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 MRPL54Q6P161 138 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms