RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 NKAIN3Q8N8D7 197 aa11.79□□□□□ -0.52
SREBF1-207ENST00000447641 C19orf18Q8NEA5 215 aa11.79□□□□□ -0.52
SREBF1-207ENST00000447641 DNAAF1Q8NEP3 725 aa11.79□□□□□ -0.52
SREBF1-207ENST00000447641 OR5D14Q8NGL3 314 aa11.79□□□□□ -0.52
SREBF1-207ENST00000447641 TMEM106AQ96A25 262 aa11.79□□□□□ -0.52
SREBF1-207ENST00000447641 FOXRED1Q96CU9 486 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-207ENST00000447641 SLIRPQ9GZT3 109 aaKnown RBP11.79□□□□□ -0.52
SREBF1-207ENST00000447641 PLEKHA1Q9HB21 404 aa11.79□□□□□ -0.52
SREBF1-207ENST00000447641 NOX4Q9NPH5 578 aa11.79□□□□□ -0.52
SREBF1-207ENST00000447641 MIOXQ9UGB7 285 aa11.79□□□□□ -0.52
SREBF1-207ENST00000447641 WNK2Q9Y3S1 2297 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 IGKV1-27A0A075B6S5 117 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 TRBV5-7A0A0A0MS05 114 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 TRAV38-1A0A0B4J264 116 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 TRAV20A0A0B4J274 112 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 PPIAL4CA0A0B4J2A2 164 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 NOTOA8MTQ0 251 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 A8MXK9 166 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 MAGEB3O15480 346 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 NDUFA2O43678 99 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 ATF1P18846 271 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 FSTP19883 344 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 ZFP36P26651 326 aaKnown RBP11.78□□□□□ -0.52
SREBF1-207ENST00000447641 CD80P33681 288 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 FUT6P51993 359 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 SCAND1P57086 179 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 RPS11P62280 158 aaKnown RBP eCLIP11.78□□□□□ -0.52
SREBF1-207ENST00000447641 KCNJ8Q15842 424 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 SPANXN2Q5MJ10 180 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 SFRP4Q6FHJ7 346 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-207ENST00000447641 ZNF529Q6P280 563 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 LYPD2Q6UXB3 125 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 SERPINA12Q8IW75 414 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 DEFB108BQ8NET1 73 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 OR51F2Q8NH61 342 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 ZNF671Q8TAW3 534 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 C6orf62Q9GZU0 229 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-207ENST00000447641 NXF2Q9GZY0 626 aaKnown RBP11.78□□□□□ -0.52
SREBF1-207ENST00000447641 ABRACLQ9P1F3 81 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 RABL2AQ9UBK7 228 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-207ENST00000447641 KAAG1Q9UBP8 84 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 PCDHB10Q9UN67 800 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 RABL2BQ9UNT1 228 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 SLC7A11Q9UPY5 501 aa11.78□□□□□ -0.52
SREBF1-207ENST00000447641 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 J3QT63 122 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 IFNA2P01563 188 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 OCMP0CE72 109 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-207ENST00000447641 HAAOP46952 286 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 ERVK11-1P61568 191 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 SEC61A1P61619 476 aaKnown RBP11.77□□□□□ -0.53
SREBF1-207ENST00000447641 SRSF2Q01130 221 aaKnown RBP11.77□□□□□ -0.53
SREBF1-207ENST00000447641 PAX2Q02962 417 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 MXD1Q05195 221 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 ZNF846Q147U1 533 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 CHRFAM7AQ494W8 412 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 ATPAF1Q5TC12 328 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-207ENST00000447641 GLT8D1Q68CQ7 371 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 HAGHLQ6PII5 290 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-207ENST00000447641 CRIP3Q6Q6R5 217 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 CALHM1Q8IU99 346 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 BOLLQ8N9W6 283 aaKnown RBP11.77□□□□□ -0.53
SREBF1-207ENST00000447641 TMEM186Q96B77 213 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 SEH1LQ96EE3 360 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 NEIL1Q96FI4 390 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-207ENST00000447641 PKIBQ9C010 78 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 WDR13Q9H1Z4 485 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 HIF1ANQ9NWT6 349 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 RASL12Q9NYN1 266 aa11.77□□□□□ -0.53
SREBF1-207ENST00000447641 RGS5O15539 181 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 AKR7A2O43488 359 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 SYNGR1O43759 233 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 FOXH1O75593 365 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 FCN3O75636 299 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 FAM157CP0CG43 387 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 PGA5P0DJD9 388 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 AMY2BP19961 511 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 PRKACBP22694 351 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 TALDO1P37837 337 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 SOX2P48431 317 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 ZNF45Q02386 682 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 IL24Q13007 206 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 CNN3Q15417 329 aaKnown RBP11.76□□□□□ -0.53
SREBF1-207ENST00000447641 MICBQ29980 383 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 STUMQ69YW2 141 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 ASPHD2Q6ICH7 369 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 GLCCI1Q86VQ1 547 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 ANGPTL5Q86XS5 388 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 CDH26Q8IXH8 852 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 POC1AQ8NBT0 407 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 OR6Q1Q8NGQ2 317 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 ZFAND2BQ8WV99 257 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 DACT3Q96B18 629 aaPredicted RBP11.76□□□□□ -0.53
SREBF1-207ENST00000447641 SPSB1Q96BD6 273 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 CMTM3Q96MX0 182 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 NRIP2Q9BQI9 281 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 ZCCHC4Q9H5U6 513 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 RNF167Q9H6Y7 350 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 HES4Q9HCC6 221 aa11.76□□□□□ -0.53
SREBF1-207ENST00000447641 CTSZQ9UBR2 303 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms