RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 ALDH3A2P51648 485 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 BMXP51813 675 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 SLC35E4Q6ICL7 350 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 FDX2Q6P4F2 183 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 SLC25A26Q70HW3 274 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 EGFL6Q8IUX8 553 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 PPP1R35Q8TAP8 253 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 PIFOQ8TCI5 191 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 C10orf35Q96D05 121 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 PPA2Q9H2U2 334 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 IMPAD1Q9NX62 359 aa16.86■□□□□ 0.29
SDC1-205ENST00000447124 SERPINA3P01011 423 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 GABRB1P18505 474 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 COX7A1P24310 79 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 LY6EQ16553 131 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 CRIP3Q6Q6R5 217 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 RNF144BQ7Z419 303 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 CBR4Q8N4T8 237 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 OR10AC1Q8NH08 325 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 FGGYQ96C11 551 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 BORCS8Q96FH0 119 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 MBOAT4Q96T53 435 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 IL36RNQ9UBH0 155 aa16.85■□□□□ 0.29
SDC1-205ENST00000447124 EXOGQ9Y2C4 368 aaKnown RBP16.85■□□□□ 0.29
SDC1-205ENST00000447124 A0A1W2PPH5 198 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 DAPL1A0PJW8 107 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 SLC16A6O15403 523 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 UBCP0CG48 685 aaKnown RBP16.84■□□□□ 0.29
SDC1-205ENST00000447124 ATF1P18846 271 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 NPBWR2P48146 333 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 TMEM244Q5VVB8 128 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 ZNF782Q6ZMW2 699 aaPredicted RBP16.84■□□□□ 0.29
SDC1-205ENST00000447124 FAM220AQ7Z4H9 259 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 KCTD20Q7Z5Y7 419 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 LHFPL4Q7Z7J7 247 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 DYNAPQ8N1N2 210 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 ASCC1Q8N9N2 400 aaKnown RBP16.84■□□□□ 0.29
SDC1-205ENST00000447124 OR52N4Q8NGI2 321 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 LGALS12Q96DT0 336 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 SLC29A1Q99808 456 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 SIGLEC9Q9Y336 463 aa16.84■□□□□ 0.29
SDC1-205ENST00000447124 FAM90A8PA6NJQ4 464 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 ISG15P05161 165 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 CALCBP10092 127 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 DUSP1P28562 367 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 ATP1B3P54709 279 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 LDLRAD2Q5SZI1 272 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 MEDAGQ5VYS4 303 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 ZFP1Q6P2D0 407 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 TCF23Q7RTU1 214 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 DNAAF1Q8NEP3 725 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 PP6455Q8WZ26 134 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 PELI1Q96FA3 418 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 SNX22Q96L94 193 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 SEBOXQ9HB31 216 aaPredicted RBP16.83■□□□□ 0.28
SDC1-205ENST00000447124 RBFOX1Q9NWB1 397 aaKnown RBP16.83■□□□□ 0.28
SDC1-205ENST00000447124 ORC6Q9Y5N6 252 aa16.83■□□□□ 0.28
SDC1-205ENST00000447124 NOTCH1P46531 2555 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 J3QLW9 94 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 IGHA1P01876 353 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 ZNF19P17023 458 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 BCL3P20749 454 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 RBP2P50120 134 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 AANATQ16613 207 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 LRRC75BQ2VPJ9 315 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 UTS2BQ765I0 119 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 ACBD7Q8N6N7 88 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 OR51A4Q8NGJ6 313 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 ZNF649Q9BS31 505 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 FBLN5Q9UBX5 448 aa16.82■□□□□ 0.28
SDC1-205ENST00000447124 DSCAML1Q8TD84 2053 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 hCG_1809904A0A1W2PP81 198 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 A0A1W2PPE2 198 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 A0A1W2PR64 198 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 A0A1W2PRV1 198 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 OR4C45A6NMZ5 311 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 TIMM23O14925 209 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 HAND1O96004 215 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 HTR1AP08908 422 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 ZNF728P0DKX0 622 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 AZGP1P25311 298 aaKnown RBP16.81■□□□□ 0.28
SDC1-205ENST00000447124 CCR9P51686 369 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 MTCP1P56278 107 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 EDDM3BP56851 147 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 ACTC1P68032 377 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 ACTA1P68133 377 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 ZNF91Q05481 1191 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 CNN3Q15417 329 aaKnown RBP16.81■□□□□ 0.28
SDC1-205ENST00000447124 CCDC121Q6ZUS5 278 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 LHFPL3Q86UP9 236 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 ENTHD1Q8IYW4 607 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 OR8H2Q8N162 312 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 TPRX1Q8N7U7 411 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 RHOXF1Q8NHV9 184 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 EMG1Q92979 244 aaKnown RBP16.81■□□□□ 0.28
SDC1-205ENST00000447124 C4orf36Q96KX1 117 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 TCF7L1Q9HCS4 588 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 MYRFQ9Y2G1 1151 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 GMPPBQ9Y5P6 360 aa16.81■□□□□ 0.28
SDC1-205ENST00000447124 IGKV1-12A0A0C4DH73 117 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms