RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PHF1O43189 567 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-208ENST00000444533 ANGPTL7O43827 346 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 ZNF780AO75290 641 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-208ENST00000444533 PSG2P11465 335 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 PRKACAP17612 351 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 SRMP19623 302 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 MYL9P24844 172 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 PRDX2P32119 198 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 PTGFRP43088 359 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 RPS25P62851 125 aaKnown RBP11.76□□□□□ -0.53
SSBP3-208ENST00000444533 IKZF1Q13422 519 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 SPIN3Q5JUX0 258 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 WDR25Q64LD2 544 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-208ENST00000444533 LYPD2Q6UXB3 125 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 UNQ9370/PRO34162Q6UXP9 181 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-208ENST00000444533 BATF2Q8N1L9 274 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 PXT1Q8NFP0 134 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 ANGPTL6Q8NI99 470 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 PPP1R35Q8TAP8 253 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 MRI1Q9BV20 369 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 SHARPINQ9H0F6 387 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 NDUFB11Q9NX14 153 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 ING4Q9UNL4 249 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 GSTK1Q9Y2Q3 226 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 VPS13CQ709C8 3753 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 ACANP16112 2415 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 TRAV8-7A0A075B6U6 113 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-208ENST00000444533 SH2D1BO14796 132 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 SIGLEC5O15389 551 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 ENSAO43768 121 aaKnown RBP11.75□□□□□ -0.53
SSBP3-208ENST00000444533 KDM4BO94953 1096 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 LIPFP07098 398 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 CHRM2P08172 466 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 NDUFB7P17568 137 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 BCL3P20749 454 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 GALP22466 123 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 MTNR1BP49286 362 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 PSMD7P51665 324 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 ERVK11-1P61568 191 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 HOXA4Q00056 320 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-208ENST00000444533 LURAP1LQ8IV03 231 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 TMEM185AQ8NFB2 350 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 H1FXQ92522 213 aaKnown RBP11.75□□□□□ -0.53
SSBP3-208ENST00000444533 ORAI1Q96D31 301 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 SEH1LQ96EE3 360 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 UQCC2Q9BRT2 126 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 ZNF696Q9H7X3 374 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 HES4Q9HCC6 221 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 EXOSC4Q9NPD3 245 aaKnown RBP11.75□□□□□ -0.53
SSBP3-208ENST00000444533 TMEM160Q9NX00 188 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 SLC25A10Q9UBX3 287 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-208ENST00000444533 CDC42EP3Q9UKI2 254 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 SSR3Q9UNL2 185 aa11.75□□□□□ -0.53
SSBP3-208ENST00000444533 A0A1W2PPH5 198 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 GABRPO00591 440 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 PDCD5O14737 125 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 UCHL1P09936 223 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 CALRP27797 417 aaKnown RBP11.74□□□□□ -0.53
SSBP3-208ENST00000444533 SEC61A1P61619 476 aaKnown RBP11.74□□□□□ -0.53
SSBP3-208ENST00000444533 SCGB2A2Q13296 93 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 TIMM50Q3ZCQ8 353 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 AWAT2Q6E213 333 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 ZNF788Q6ZQV5 615 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 FAM216BQ8N7L0 139 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 ASCC1Q8N9N2 400 aaKnown RBP11.74□□□□□ -0.53
SSBP3-208ENST00000444533 OR5D13Q8NGL4 314 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 RAB40AQ8WXH6 277 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 BEX2Q9BXY8 128 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 HMG20AQ9NP66 347 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 RBFOX1Q9NWB1 397 aaKnown RBP11.74□□□□□ -0.53
SSBP3-208ENST00000444533 MRPS28Q9Y2Q9 187 aaKnown RBP11.74□□□□□ -0.53
SSBP3-208ENST00000444533 POLR3KQ9Y2Y1 108 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-208ENST00000444533 ABCA1O95477 2261 aa11.74□□□□□ -0.53
SSBP3-208ENST00000444533 IGKV1D-17A0A075B6S4 117 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 TNFRSF13BO14836 293 aaPredicted RBP11.73□□□□□ -0.53
SSBP3-208ENST00000444533 SC5DO75845 299 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 HTR3BO95264 441 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 HAND1O96004 215 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 SRP14P37108 136 aaKnown RBP11.73□□□□□ -0.53
SSBP3-208ENST00000444533 OR3A4PP47883 348 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 NPBWR2P48146 333 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 SNU13P55769 128 aaKnown RBP11.73□□□□□ -0.53
SSBP3-208ENST00000444533 CAV3P56539 151 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 ZP1P60852 638 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 FGF12P61328 243 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 FABP5Q01469 135 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 KRTAP1-1Q07627 177 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 INSL4Q14641 139 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 SSX1Q16384 188 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 CR1LQ2VPA4 569 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 CHRFAM7AQ494W8 412 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 SYT6Q5T7P8 510 aaPredicted RBP11.73□□□□□ -0.53
SSBP3-208ENST00000444533 BTN2A1Q7KYR7 527 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 CMTM4Q8IZR5 234 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 TBC1D15Q8TC07 691 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 SDSLQ96GA7 329 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 GAFA1Q96PS6 74 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 NUDT16L1Q9BRJ7 211 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms