RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 RXFP4Q8TDU9 374 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 GLYATL2Q8WU03 294 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 FAAP24Q9BTP7 215 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 ARV1Q9H2C2 271 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 PLEKHA2Q9HB19 425 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 BIN3Q9NQY0 253 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 LSM5Q9Y4Y9 91 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 ZNF98A6NK75 572 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 ANGPTL7O43827 346 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 DVL1P1P54792 670 aaPredicted RBP14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 PIGPP57054 158 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 RAB35Q15286 201 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 AVPI1Q5T686 147 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 CDCP2Q5VXM1 449 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 DHRS11Q6UWP2 260 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 DHRS13Q6UX07 377 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 GNRHR2Q96P88 292 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 COL25A1Q9BXS0 654 aaPredicted RBP14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 NAA60Q9H7X0 242 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 NECAP2Q9NVZ3 263 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 NXT1Q9UKK6 140 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 KIAA1549Q9HCM3 1950 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 IGKV1-27A0A075B6S5 117 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 IGHV1-45A0A0A0MS14 117 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 TERTO14746 1132 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 CRYBA1P05813 215 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 CHATP28329 748 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 CD80P33681 288 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 TMEM187Q14656 261 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 RSU1Q15404 277 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 TAF9Q16594 264 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 ASCL4Q6XD76 172 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 ZNF837Q96EG3 531 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 GALNT14Q96FL9 552 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 LRFN3Q9BTN0 628 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 SH2D2AQ9NP31 389 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 ZNF581Q9P0T4 197 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 DKKL1Q9UK85 242 aa14.24□□□□□ -0.13
CLCNKA-203ENST00000439316 C9J4A7 227 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 AGPAT2O15120 278 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 SPRY1O43609 319 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 SYNGR3O43761 229 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 OR8U9P0C7N5 309 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 JMJD7P0C870 316 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 ZNF728P0DKX0 622 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 PAX6P26367 422 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 RPL35P42766 123 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 ID4P47928 161 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 HGFACQ04756 655 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 CNN3Q15417 329 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 LRTM2Q8N967 370 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 OR8U1Q8NH10 309 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 OR2AE1Q8NHA4 323 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 ERGIC1Q969X5 290 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 REEP6Q96HR9 211 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 KIRREL1Q96J84 757 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 IMMP1LQ96LU5 166 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 CMSS1Q9BQ75 279 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 SULT4A1Q9BR01 284 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 SMIM3Q9BZL3 60 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 ESRP2Q9H6T0 727 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 RNF122Q9H9V4 155 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 SDK2Q58EX2 2172 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 A0A0J9YW62 118 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 FAM230AA0A1W2PPH8 454 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 PQLC2LA1A4F0 135 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 E5RGE8 158 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 SGCEO43556 437 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 SCGB1D2O95969 90 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 MT-CO3P00414 261 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 MBPP02686 304 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 SPP1P10451 314 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 COX6A1P12074 109 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 OPRM1P35372 400 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 AKR1D1P51857 326 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 RRADP55042 308 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 TRIP6Q15654 476 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 FAM76BQ5HYJ3 339 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 GPR137CQ8N3F9 429 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 TOMM40LQ969M1 308 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 SRXN1Q9BYN0 137 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 ZNF700Q9H0M5 742 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 KCNIP3Q9Y2W7 256 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 NSG2Q9Y328 171 aa14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 PTRH2Q9Y3E5 179 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-203ENST00000439316 A0A1W2PNU3 283 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 COLCA2A8K830 154 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 TNFSF11O14788 317 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 KLF7O75840 302 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 UMODP07911 640 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 OR5AC1P0C628 307 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 CHAF1BQ13112 559 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 PEA15Q15121 130 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 EXT1Q16394 746 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 SWI5Q1ZZU3 235 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 TAAR9Q96RI9 348 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 SUCNR1Q9BXA5 334 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 COA4Q9NYJ1 87 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 CACFD1Q9UGQ2 172 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 STARD10Q9Y365 291 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms