RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 OR10AD1Q8NGE0 317 aa13.36□□□□□ -0.27
APP-208ENST00000439274 OR52M1Q8NGK5 317 aa13.36□□□□□ -0.27
APP-208ENST00000439274 SH3BGRL3Q9H299 93 aa13.36□□□□□ -0.27
APP-208ENST00000439274 ZDHHC8Q9ULC8 765 aa13.36□□□□□ -0.27
APP-208ENST00000439274 COL6A3P12111 3177 aa13.35□□□□□ -0.27
APP-208ENST00000439274 SHANK1Q9Y566 2161 aa13.35□□□□□ -0.27
APP-208ENST00000439274 PI4KAP42356 2102 aa13.35□□□□□ -0.27
APP-208ENST00000439274 TSPAN15O95858 294 aa13.35□□□□□ -0.27
APP-208ENST00000439274 ONECUT2O95948 504 aa13.35□□□□□ -0.27
APP-208ENST00000439274 UMODP07911 640 aa13.35□□□□□ -0.27
APP-208ENST00000439274 FAM3AP98173 230 aa13.35□□□□□ -0.27
APP-208ENST00000439274 HABP2Q14520 560 aaPredicted RBP13.35□□□□□ -0.27
APP-208ENST00000439274 FAM27BQ5VT28 67 aa13.35□□□□□ -0.27
APP-208ENST00000439274 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.35□□□□□ -0.27
APP-208ENST00000439274 TMEM156Q8N614 296 aa13.35□□□□□ -0.27
APP-208ENST00000439274 UBAC2Q8NBM4 344 aa13.35□□□□□ -0.27
APP-208ENST00000439274 CLDN23Q96B33 292 aa13.35□□□□□ -0.27
APP-208ENST00000439274 NAA11Q9BSU3 229 aaPredicted RBP13.35□□□□□ -0.27
APP-208ENST00000439274 CRLF2Q9HC73 371 aa13.35□□□□□ -0.27
APP-208ENST00000439274 RPS10P5Q9NQ39 176 aa13.35□□□□□ -0.27
APP-208ENST00000439274 EDARQ9UNE0 448 aa13.35□□□□□ -0.27
APP-208ENST00000439274 KCNIP3Q9Y2W7 256 aa13.35□□□□□ -0.27
APP-208ENST00000439274 CCDC187A0A096LP49 1063 aa13.35□□□□□ -0.27
APP-208ENST00000439274 IGHV1-45A0A0A0MS14 117 aa13.35□□□□□ -0.27
APP-208ENST00000439274 A0A1B0GV50 99 aa13.35□□□□□ -0.27
APP-208ENST00000439274 SYNGR3O43761 229 aa13.35□□□□□ -0.27
APP-208ENST00000439274 VAMP5O95183 116 aa13.35□□□□□ -0.27
APP-208ENST00000439274 B4GALT1P15291 398 aa13.35□□□□□ -0.27
APP-208ENST00000439274 ASCL1P50553 236 aa13.35□□□□□ -0.27
APP-208ENST00000439274 DSCR4P56555 118 aaPredicted RBP13.35□□□□□ -0.27
APP-208ENST00000439274 ZNF468Q5VIY5 522 aaPredicted RBP13.35□□□□□ -0.27
APP-208ENST00000439274 FBXL14Q8N1E6 418 aa13.35□□□□□ -0.27
APP-208ENST00000439274 SPEM1Q8N4L4 309 aa13.35□□□□□ -0.27
APP-208ENST00000439274 LYPD6BQ8NI32 183 aa13.35□□□□□ -0.27
APP-208ENST00000439274 SFT2D1Q8WV19 159 aa13.35□□□□□ -0.27
APP-208ENST00000439274 SPSB1Q96BD6 273 aa13.35□□□□□ -0.27
APP-208ENST00000439274 C10orf35Q96D05 121 aa13.35□□□□□ -0.27
APP-208ENST00000439274 ALKBH3Q96Q83 286 aaPredicted RBP13.35□□□□□ -0.27
APP-208ENST00000439274 C20orf24Q9BUV8 137 aa13.35□□□□□ -0.27
APP-208ENST00000439274 ANGPTL4Q9BY76 406 aa13.35□□□□□ -0.27
APP-208ENST00000439274 SLC2A9Q9NRM0 540 aa13.35□□□□□ -0.27
APP-208ENST00000439274 SMCO4Q9NRQ5 59 aa13.35□□□□□ -0.27
APP-208ENST00000439274 PTRH2Q9Y3E5 179 aaKnown RBP13.35□□□□□ -0.27
APP-208ENST00000439274 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
APP-208ENST00000439274 E5RGE8 158 aa13.34□□□□□ -0.27
APP-208ENST00000439274 APOC1P02654 83 aa13.34□□□□□ -0.27
APP-208ENST00000439274 MRPS34P82930 218 aaKnown RBP13.34□□□□□ -0.27
APP-208ENST00000439274 Q6ZPA2 131 aa13.34□□□□□ -0.27
APP-208ENST00000439274 BORCS8Q96FH0 119 aa13.34□□□□□ -0.27
APP-208ENST00000439274 PLEKHA2Q9HB19 425 aa13.34□□□□□ -0.27
APP-208ENST00000439274 FAM212BQ9NTI7 297 aaPredicted RBP13.34□□□□□ -0.27
APP-208ENST00000439274 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
APP-208ENST00000439274 K7ESF4 209 aa13.34□□□□□ -0.27
APP-208ENST00000439274 SNRNP70P08621 437 aaKnown RBP13.34□□□□□ -0.27
APP-208ENST00000439274 COX6A1P12074 109 aa13.34□□□□□ -0.27
APP-208ENST00000439274 DAOP14920 347 aa13.34□□□□□ -0.27
APP-208ENST00000439274 SNCAP37840 140 aa13.34□□□□□ -0.27
APP-208ENST00000439274 RBP2P50120 134 aa13.34□□□□□ -0.27
APP-208ENST00000439274 SNRPEP62304 92 aaKnown RBP13.34□□□□□ -0.27
APP-208ENST00000439274 NHLH2Q02577 135 aa13.34□□□□□ -0.27
APP-208ENST00000439274 RAB35Q15286 201 aa13.34□□□□□ -0.27
APP-208ENST00000439274 SKA3Q8IX90 412 aa13.34□□□□□ -0.27
APP-208ENST00000439274 HSF4Q9ULV5 492 aa13.34□□□□□ -0.27
APP-208ENST00000439274 STARD10Q9Y365 291 aa13.34□□□□□ -0.27
APP-208ENST00000439274 TIMM10BQ9Y5J6 103 aa13.34□□□□□ -0.27
APP-208ENST00000439274 A0A0G2JMM0 328 aa13.33□□□□□ -0.28
APP-208ENST00000439274 A0A1W2PPB8 328 aa13.33□□□□□ -0.28
APP-208ENST00000439274 A0A1W2PRS3 328 aa13.33□□□□□ -0.28
APP-208ENST00000439274 PQLC2LA1A4F0 135 aa13.33□□□□□ -0.28
APP-208ENST00000439274 KIR3DP1A8MWS1 328 aa13.33□□□□□ -0.28
APP-208ENST00000439274 ZNF32P17041 273 aa13.33□□□□□ -0.28
APP-208ENST00000439274 C5orf24Q7Z6I8 188 aa13.33□□□□□ -0.28
APP-208ENST00000439274 YRDCQ86U90 279 aaKnown RBP13.33□□□□□ -0.28
APP-208ENST00000439274 HSD17B11Q8NBQ5 300 aa13.33□□□□□ -0.28
APP-208ENST00000439274 OR1F12Q8NHA8 337 aa13.33□□□□□ -0.28
APP-208ENST00000439274 ISOC2Q96AB3 205 aa13.33□□□□□ -0.28
APP-208ENST00000439274 IMMP1LQ96LU5 166 aa13.33□□□□□ -0.28
APP-208ENST00000439274 IP6K3Q96PC2 410 aa13.33□□□□□ -0.28
APP-208ENST00000439274 DTYMKP23919 212 aa13.33□□□□□ -0.28
APP-208ENST00000439274 MEOX2P50222 304 aa13.33□□□□□ -0.28
APP-208ENST00000439274 SSR4P51571 173 aa13.33□□□□□ -0.28
APP-208ENST00000439274 SUCLG1P53597 346 aaKnown RBP13.33□□□□□ -0.28
APP-208ENST00000439274 CNN3Q15417 329 aaKnown RBP13.33□□□□□ -0.28
APP-208ENST00000439274 GUK1Q16774 197 aa13.33□□□□□ -0.28
APP-208ENST00000439274 AWAT1Q58HT5 328 aa13.33□□□□□ -0.28
APP-208ENST00000439274 LIAT1Q6ZQX7 453 aa13.33□□□□□ -0.28
APP-208ENST00000439274 FGFBP3Q8TAT2 258 aa13.33□□□□□ -0.28
APP-208ENST00000439274 MR1Q95460 341 aa13.33□□□□□ -0.28
APP-208ENST00000439274 HIST1H2BAQ96A08 127 aa13.33□□□□□ -0.28
APP-208ENST00000439274 C18orf12Q96KH6 178 aa13.33□□□□□ -0.28
APP-208ENST00000439274 USB1Q9BQ65 265 aaKnown RBP13.33□□□□□ -0.28
APP-208ENST00000439274 DUSP23Q9BVJ7 150 aa13.33□□□□□ -0.28
APP-208ENST00000439274 SCRT1Q9BWW7 348 aa13.33□□□□□ -0.28
APP-208ENST00000439274 ARV1Q9H2C2 271 aa13.33□□□□□ -0.28
APP-208ENST00000439274 ST3GAL6Q9Y274 331 aa13.33□□□□□ -0.28
APP-208ENST00000439274 RFNGQ9Y644 331 aa13.33□□□□□ -0.28
APP-208ENST00000439274 POMT1Q9Y6A1 747 aa13.33□□□□□ -0.28
APP-208ENST00000439274 LOC102723996A0A087X1L8 192 aa13.32□□□□□ -0.28
APP-208ENST00000439274 TERTO14746 1132 aaKnown RBP13.32□□□□□ -0.28
APP-208ENST00000439274 PHF1O43189 567 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms