RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 DCSTAMPQ9H295 470 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 HMG20AQ9NP66 347 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 BATF3Q9NR55 127 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 DCAF16Q9NXF7 216 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 FBLN5Q9UBX5 448 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 H3BMQ9 156 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 H3BUI4 141 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 SFTPBP07988 381 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 CALCBP10092 127 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 CD80P33681 288 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 RPS19P39019 145 aaKnown RBP15.42■□□□□ 0.06
HDAC6-208ENST00000438518 NPBWR2P48146 333 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 DYNC1I2Q13409 638 aaKnown RBP15.42■□□□□ 0.06
HDAC6-208ENST00000438518 IL13RA2Q14627 380 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 ZNF146Q15072 292 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 ZMYND11Q15326 602 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 C1QL2Q7Z5L3 287 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 NR2C2APQ86WQ0 139 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 KRTAP1-3Q8IUG1 177 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 KCTD12Q96CX2 325 aaKnown RBP15.42■□□□□ 0.06
HDAC6-208ENST00000438518 C1orf147Q96MC9 270 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-208ENST00000438518 WDR13Q9H1Z4 485 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 TMEM165Q9HC07 324 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 RBFOX1Q9NWB1 397 aaKnown RBP15.42■□□□□ 0.06
HDAC6-208ENST00000438518 ABRACLQ9P1F3 81 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 ITPR2Q14571 2701 aa15.42■□□□□ 0.06
HDAC6-208ENST00000438518 ISPDA4D126 451 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 OR2AT4A6NND4 320 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 C3orf80F5H4A9 247 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 HTR3BO95264 441 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 HEXAP06865 529 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 PRKACAP17612 351 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 TGFBR1P36897 503 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 RORCP51449 518 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 SLC22A6Q4U2R8 563 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 HES5Q5TA89 166 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 ATPAF1Q5TC12 328 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-208ENST00000438518 STUMQ69YW2 141 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 SLC36A1Q7Z2H8 476 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 OSR2Q8N2R0 312 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 BOLLQ8N9W6 283 aaKnown RBP15.41■□□□□ 0.06
HDAC6-208ENST00000438518 PTX4Q96A99 478 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 FAM3DQ96BQ1 224 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 ZNF488Q96MN9 340 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 LIN7BQ9HAP6 207 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 KAAG1Q9UBP8 84 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 MIOXQ9UGB7 285 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 NAV2Q8IVL1 2488 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 ARID1AO14497 2285 aa15.41■□□□□ 0.06
HDAC6-208ENST00000438518 IGHV4-30-2A0A087WSY4 118 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A10PA6NDY2 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A18PA6NE21 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A16PA6NEW6 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A20PA6NIJ5 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 NKX6-3A6NJ46 265 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A8PA6NJQ4 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A7PA6NKC0 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A22PA8MWA6 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 TMEM14DPA8MWL7 114 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A12PA8MX19 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A5PA8MXJ8 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A23PA8MXZ1 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 WNT9BO14905 357 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A15PP0C7V4 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A13PP0C7W8 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A14PP0C7W9 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 FAM90A24PP0C7X0 464 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 SERPINA2P20848 420 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 SOX6P35712 828 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 HNRNPA0Q13151 305 aaKnown RBP15.4■□□□□ 0.06
HDAC6-208ENST00000438518 MPV17LQ2QL34 196 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 AVPI1Q5T686 147 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 SFRP4Q6FHJ7 346 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-208ENST00000438518 ANGPTL6Q8NI99 470 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 NDNFQ8TB73 568 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 ACOT12Q8WYK0 555 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 AP3S1Q92572 193 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 RAB39BQ96DA2 213 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 GAL3ST1Q99999 423 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 TMEM246Q9BRR3 403 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 ZNF665Q9H7R5 613 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 DAPK2Q9UIK4 370 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 ETV7Q9Y603 341 aa15.4■□□□□ 0.06
HDAC6-208ENST00000438518 DPPA5A6NC42 116 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 F8VVB4 439 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 F8VWA3 439 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 CLEC2LP0C7M8 214 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 VSIG8P0DPA2 414 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 PSG2P11465 335 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 MGMTP16455 207 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 RAB6AP20340 208 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 FAM201AQ5SY85 155 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 NLRC3Q7RTR2 1065 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 CHST4Q8NCG5 386 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 OR51D1Q8NGF3 324 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 DGCR14Q96DF8 476 aaKnown RBP15.39■□□□□ 0.05
HDAC6-208ENST00000438518 SDSLQ96GA7 329 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 MED30Q96HR3 178 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 Q96MF0 132 aa15.39■□□□□ 0.05
HDAC6-208ENST00000438518 NKX3-1Q99801 234 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms