RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 BCO1Q9HAY6 547 aa16.1■□□□□ 0.17
CLK1-205ENST00000434813 TMEM100Q9NV29 134 aa16.1■□□□□ 0.17
CLK1-205ENST00000434813 FOXJ2Q9P0K8 574 aa16.1■□□□□ 0.17
CLK1-205ENST00000434813 PCDHB10Q9UN67 800 aa16.1■□□□□ 0.17
CLK1-205ENST00000434813 NOSIPQ9Y314 301 aaKnown RBP16.1■□□□□ 0.17
CLK1-205ENST00000434813 GEMIN2O14893 280 aaKnown RBP16.09■□□□□ 0.17
CLK1-205ENST00000434813 PDZK1IP1Q13113 114 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 RBM39Q14498 530 aaKnown RBP16.09■□□□□ 0.17
CLK1-205ENST00000434813 PIGYQ3MUY2 71 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 PLCXD3Q63HM9 321 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 B4GALT7Q9UBV7 327 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 DOCK10Q96BY6 2186 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 RAB19A4D1S5 217 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 MRPL33O75394 65 aaKnown RBP16.09■□□□□ 0.17
CLK1-205ENST00000434813 LHX2P50458 406 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 AIMP2Q13155 320 aaKnown RBP16.09■□□□□ 0.17
CLK1-205ENST00000434813 DHRS11Q6UWP2 260 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 COLCA1Q6ZS62 124 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 FBXL14Q8N1E6 418 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 SPERTQ8NA61 448 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 OR1S2Q8NGQ3 325 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 LIME1Q9H400 295 aa16.09■□□□□ 0.17
CLK1-205ENST00000434813 CNTRLQ7Z7A1 2325 aa16.08■□□□□ 0.17
CLK1-205ENST00000434813 A0A1W2PNU3 283 aaPredicted RBP16.08■□□□□ 0.16
CLK1-205ENST00000434813 SFTPBP07988 381 aa16.08■□□□□ 0.16
CLK1-205ENST00000434813 PXDC1Q5TGL8 231 aa16.08■□□□□ 0.16
CLK1-205ENST00000434813 CPEB3Q8NE35 698 aaKnown RBP16.08■□□□□ 0.16
CLK1-205ENST00000434813 MARC2Q969Z3 335 aa16.08■□□□□ 0.16
CLK1-205ENST00000434813 SIGLEC12Q96PQ1 595 aa16.08■□□□□ 0.16
CLK1-205ENST00000434813 PCDHB16Q9NRJ7 776 aa16.08■□□□□ 0.16
CLK1-205ENST00000434813 ASF1BQ9NVP2 202 aa16.08■□□□□ 0.16
CLK1-205ENST00000434813 APOC3P02656 99 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 OPRM1P35372 400 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 RRADP55042 308 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 CLDN18P56856 261 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 S100A10P60903 97 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 IAH1Q2TAA2 248 aaPredicted RBP16.07■□□□□ 0.16
CLK1-205ENST00000434813 ABHD17BQ5VST6 288 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 BPIFCQ8NFQ6 507 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 LHFPL5Q8TAF8 219 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 FNDC9Q8TBE3 224 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 RNF141Q8WVD5 230 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 GPR87Q9BY21 358 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 SLC5A7Q9GZV3 580 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 ACKR4Q9NPB9 350 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 ST3GAL6Q9Y274 331 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 ZNF850A8MQ14 1090 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 C21orf140B9A014 251 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 ZNF587BE7ETH6 402 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 PDCD6O75340 191 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 IGHV3-9P01782 118 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 RBM11P57052 281 aaKnown RBP16.07■□□□□ 0.16
CLK1-205ENST00000434813 ZNF585AQ6P3V2 769 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 PIGCQ92535 297 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 SLC7A10Q9NS82 523 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 GSKIPQ9P0R6 139 aa16.07■□□□□ 0.16
CLK1-205ENST00000434813 RPL36A-HNRNPH2H7BZ11 118 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 CD79AP11912 226 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 ZNF273Q14593 569 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 TMED6Q8WW62 240 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 DYRK2Q92630 601 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 POM121Q96HA1 1249 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 CNTNAP3BQ96NU0 1288 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 CNTNAP3Q9BZ76 1288 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 SLC6A15Q9H2J7 730 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 PARD6AQ9NPB6 346 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 PARPBPQ9NWS1 579 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 ABI3Q9P2A4 366 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 TUBD1Q9UJT1 453 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 TAAR5O14804 337 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 LRP3O75074 770 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 TNFSF15O95150 251 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 CELA3AP09093 270 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 ZNF728P0DKX0 622 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 ZNF708P17019 499 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 RFC3P40938 356 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 PMELP40967 661 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 PIGPP57054 158 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 ARF1P84077 181 aaKnown RBP16.06■□□□□ 0.16
CLK1-205ENST00000434813 NAXEQ8NCW5 288 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 GALNT14Q96FL9 552 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 MARS2Q96GW9 593 aaKnown RBP16.06■□□□□ 0.16
CLK1-205ENST00000434813 ZNF286AQ9HBT8 521 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 C12orf4Q9NQ89 552 aa16.06■□□□□ 0.16
CLK1-205ENST00000434813 TSPAN4O14817 238 aa16.05■□□□□ 0.16
CLK1-205ENST00000434813 IFNA21P01568 189 aa16.05■□□□□ 0.16
CLK1-205ENST00000434813 MALLQ13021 153 aa16.05■□□□□ 0.16
CLK1-205ENST00000434813 SLC22A25Q6T423 547 aa16.05■□□□□ 0.16
CLK1-205ENST00000434813 PIP4P1Q86T03 277 aa16.05■□□□□ 0.16
CLK1-205ENST00000434813 CALHM1Q8IU99 346 aa16.05■□□□□ 0.16
CLK1-205ENST00000434813 FAM219AQ8IW50 185 aa16.05■□□□□ 0.16
CLK1-205ENST00000434813 ZNF611Q8N823 705 aa16.05■□□□□ 0.16
CLK1-205ENST00000434813 HES7Q9BYE0 225 aa16.05■□□□□ 0.16
CLK1-205ENST00000434813 NAA60Q9H7X0 242 aa16.05■□□□□ 0.16
CLK1-205ENST00000434813 NUDT19A8MXV4 375 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 EIF5AP63241 154 aaKnown RBP16.04■□□□□ 0.16
CLK1-205ENST00000434813 NHLH1Q02575 133 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 SRYQ05066 204 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 OR1C1Q15619 314 aa16.04■□□□□ 0.16
CLK1-205ENST00000434813 GGNBP1Q5YKI7 109 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms