RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 FAM58AQ8N1B3 248 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 GCSAMQ8N6F7 178 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 C19orf18Q8NEA5 215 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 DEFB108BQ8NET1 73 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR51T1Q8NGJ9 327 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 IGFBPL1Q8WX77 278 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 YIPF5Q969M3 257 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 PHF21AQ96BD5 680 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 SLC25A38Q96DW6 304 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 TIMD4Q96H15 378 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 URM1Q9BTM9 101 aaKnown RBP6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 ATG5Q9H1Y0 275 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 MMP27Q9H306 513 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 BARX1Q9HBU1 254 aaPredicted RBP6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 HMG20AQ9NP66 347 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 DLL4Q9NR61 685 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 RHBDL2Q9NX52 303 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 IL36RNQ9UBH0 155 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR14J1Q9UGF5 321 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 ADAM30Q9UKF2 790 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 RAB22AQ9UL26 194 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 SPATA2Q9UM82 520 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 ABCA4P78363 2273 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 CENPEQ02224 2701 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 A0A075B6Q4 140 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ISPDA4D126 451 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 METTL21EPA6NDL7 271 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 OOEPA6NGQ2 149 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 NKX6-3A6NJ46 265 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 TMEM178BH3BS89 294 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 LGALS8O00214 317 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 CTDSP2O14595 271 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 GEMIN2O14893 280 aaKnown RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 LDLRAD4O15165 306 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 PPIHO43447 177 aaKnown RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 RP2O75695 350 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR7C1O76099 320 aaPredicted RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 F12P00748 615 aaPredicted RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 KNG1P01042 644 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 APOA1P02647 267 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ACAA1P09110 424 aaPredicted RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ZNF44P15621 663 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 CPT2P23786 658 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 GABRR1P24046 479 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 COL8A2P25067 703 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 DUSP1P28562 367 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 CFHR2P36980 270 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 TALDO1P37837 337 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 PTH2RP49190 550 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ERVK11-1P61568 191 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 BTG1P62324 171 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 RPS27AP62979 156 aaKnown RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 QRFPP83859 136 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 SCN1BQ07699 218 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 PLA2G7Q13093 441 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 FAM189A2Q15884 450 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 TAF9Q16594 264 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 MICBQ29980 383 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ZNF181Q2M3W8 571 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 SPIN3Q5JUX0 258 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 NKAPLQ5M9Q1 402 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 AVPI1Q5T686 147 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 SFRP4Q6FHJ7 346 aaPredicted RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ELP2Q6IA86 826 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ACP7Q6ZNF0 438 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 CDH24Q86UP0 819 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ZNF525Q8N782 197 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR5T2Q8NGG2 359 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 SEH1LQ96EE3 360 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 MRPS24Q96EL2 167 aaKnown RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 LURAP1Q96LR2 239 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 Q96M66 194 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 NXF2Q9GZY0 626 aaKnown RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 CHODLQ9H9P2 273 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 RHOFQ9HBH0 211 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 HES4Q9HCC6 221 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ZNF701Q9NV72 531 aaPredicted RBP6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 RASL12Q9NYN1 266 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 NLKQ9UBE8 527 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 FBLN5Q9UBX5 448 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 GLS2Q9UI32 602 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ST3GAL6Q9Y274 331 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 PEX16Q9Y5Y5 336 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 A3GALT2U3KPV4 340 aa6.65□□□□□ -1.34
HMGA1P4-201ENST00000428643 ITPR2Q14571 2701 aa6.65□□□□□ -1.35
HMGA1P4-201ENST00000428643 UNC79Q9P2D8 2635 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 PPIAL4EA0A075B759 164 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 TRAV38-1A0A0B4J264 116 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR2AT4A6NND4 320 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 PPIAL4DF5H284 164 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 SIRPB1O00241 398 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 HSPB6O14558 160 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 SCGNO76038 276 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 HAND1O96004 215 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 LHBP01229 141 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 TFF1P04155 84 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 EIF4EP06730 217 aaKnown RBP6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 CSF3P09919 207 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 PPIAL4FP0DN26 164 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms