RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PBLDP30039 288 aaPredicted RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 LSSP48449 732 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 ARMC6Q6NXE6 501 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 TTLL10Q6ZVT0 673 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 D2HGDHQ8N465 521 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 CLDND2Q8NHS1 167 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 KCNE4Q8WWG9 221 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 FAM46BQ96A09 425 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 TMEM18Q96B42 140 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 TMEM59Q9BXS4 323 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 LIME1Q9H400 295 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 METTL8Q9H825 291 aaKnown RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 FBN2P35556 2912 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 OR3A1P47881 315 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 SLC37A1P57057 533 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 CCL20P78556 96 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 SERF2P84101 59 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 MACROD1Q9BQ69 325 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 FAM206AQ9NX38 181 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 MMACHCQ9Y4U1 282 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 TTRP02766 147 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 ZNF888P0CJ79 500 aaPredicted RBP4.49□□□□□ -1.69
RIF1-203ENST00000428287 LCN2P80188 198 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 SGCBQ16585 318 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 ZNF774Q6NX45 483 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 LIAT1Q6ZQX7 453 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 OR1P1Q8NH06 330 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 PTPMT1Q8WUK0 201 aaPredicted RBP4.49□□□□□ -1.69
RIF1-203ENST00000428287 GPR87Q9BY21 358 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 IGF2RP11717 2491 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 NAV2Q8IVL1 2488 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 SOCS1O15524 211 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 TMEM50AO95807 157 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 CEACAM5P06731 702 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 CMPK1P30085 196 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 BRS3P32247 399 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 PPM1AP35813 382 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 UBE2KP61086 200 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 GABREP78334 506 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 RNPS1Q15287 305 aaKnown RBP4.49□□□□□ -1.69
RIF1-203ENST00000428287 USF2Q15853 346 aaPredicted RBP4.49□□□□□ -1.69
RIF1-203ENST00000428287 NAXEQ8NCW5 288 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 CYB5D2Q8WUJ1 264 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 TAAR8Q969N4 342 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 MRPL13Q9BYD1 178 aaKnown RBP4.49□□□□□ -1.69
RIF1-203ENST00000428287 TBL1XR1Q9BZK7 514 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 OR1A2Q9Y585 309 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 MTORP42345 2549 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 A0A1W2PPQ1 181 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 NME2P1O60361 137 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 RENP00797 406 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 CSN2P05814 226 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 FABP4P15090 132 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 ZNF77Q15935 545 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 TMEM249Q2WGJ8 235 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 C1QL3Q5VWW1 255 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 RTL6Q6ICC9 239 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 OR13G1Q8NGZ3 307 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 PPP1R14AQ96A00 147 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 NSG1A0A0A6YYJ2 146 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 PRRT4C9JH25 899 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 SEMA4FO95754 770 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 PI3P19957 117 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 GLRA1P23415 457 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 SNU13P55769 128 aaKnown RBP4.49□□□□□ -1.69
RIF1-203ENST00000428287 C1orf87Q8N0U7 546 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 CCDC168Q8NDH2 2452 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 OR4N2Q8NGD1 307 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 TGIF2Q9GZN2 237 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 SDF2L1Q9HCN8 221 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 SLC2A9Q9NRM0 540 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 A0A1W2PRU2 124 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 SCAF4O95104 1147 aaKnown RBP4.49□□□□□ -1.69
RIF1-203ENST00000428287 CST2P09228 141 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 CD99P14209 185 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 BPIFB3P59826 476 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 BAXQ07812 192 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 AARDQ4LEZ3 155 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 WDR25Q64LD2 544 aaPredicted RBP4.49□□□□□ -1.69
RIF1-203ENST00000428287 ZNF429Q86V71 674 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 HIST1H2AAQ96QV6 131 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 ANXA10Q9UJ72 324 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 RNF115Q9Y4L5 304 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 NSA2O95478 260 aaKnown RBP4.49□□□□□ -1.69
RIF1-203ENST00000428287 TIMP1P01033 207 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 PGA4P0DJD7 388 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 PGA5P0DJD9 388 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 APLNRP35414 380 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 CDKN1BP46527 198 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 BTN3A2P78410 334 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 HLA-DRB3P79483 266 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 SLC9A3R2Q15599 337 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 CD226Q15762 336 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 TAF9Q16594 264 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 Q6ZS49 121 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 PRSS41Q7RTY9 318 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 C20orf196Q8IYI0 205 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 ZNF615Q8N8J6 731 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 C16orf52Q8NHV5 167 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 MRGPRDQ8TDS7 321 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms