RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 ZNF610Q8N9Z0 462 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 IL1F10Q8WWZ1 152 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 ZNF524Q96C55 264 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 MAGT1Q9H0U3 335 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 SLC7A11Q9UPY5 501 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 IGHV3-64DA0A0J9YX35 117 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 NDUFS6O75380 124 aaKnown RBP9.02□□□□□ -0.97
CTCFL-206ENST00000426658 PTGER4P35408 488 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 RPS18P62269 152 aaKnown RBP9.02□□□□□ -0.97
CTCFL-206ENST00000426658 SURF2Q15527 256 aaPredicted RBP9.02□□□□□ -0.97
CTCFL-206ENST00000426658 NKAIN1Q4KMZ8 207 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 UBAC2Q8NBM4 344 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 OR2AE1Q8NHA4 323 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 ERGIC1Q969X5 290 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 NUDT16L1Q9BRJ7 211 aaKnown RBP9.02□□□□□ -0.97
CTCFL-206ENST00000426658 SOX7Q9BT81 388 aa9.02□□□□□ -0.97
CTCFL-206ENST00000426658 SERPINE3A8MV23 424 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 S100GP29377 79 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 RRADP55042 308 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 FOXC1Q12948 553 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 ZNF695Q8IW36 515 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 SLC38A9Q8NBW4 561 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 OR10G3Q8NGC4 313 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 OR8B12Q8NGG6 310 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 OR1N1Q8NGS0 311 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 RTN4IP1Q8WWV3 396 aaPredicted RBP9.01□□□□□ -0.97
CTCFL-206ENST00000426658 HIST1H2AAQ96QV6 131 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 NIPSNAP3BQ9BS92 247 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 TGIF2Q9GZN2 237 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 SPTBN4Q9H254 2564 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 DOCK7Q96N67 2140 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 GPR37O15354 613 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 ZNHIT1O43257 154 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 ZFAND5O76080 213 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 LINC00271P0C7V0 271 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 PATE4P0C8F1 98 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 KISS1Q15726 138 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 TMEM268Q5VZI3 342 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 ZFP62Q8NB50 900 aaPredicted RBP9.01□□□□□ -0.97
CTCFL-206ENST00000426658 OR14L1PQ8NHC6 308 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 SPTSSAQ969W0 71 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 SGCZQ96LD1 299 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 MESP1Q9BRJ9 268 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 ZNF729A6NN14 1252 aaPredicted RBP9.01□□□□□ -0.97
CTCFL-206ENST00000426658 ZNF587BE7ETH6 402 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 DUSP1P28562 367 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 TMEM50BP56557 158 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 TLE1Q04724 770 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 LGI3Q8N145 548 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 GPR137CQ8N3F9 429 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 HDHD3Q9BSH5 251 aaPredicted RBP9.01□□□□□ -0.97
CTCFL-206ENST00000426658 SEBOXQ9HB31 216 aaPredicted RBP9.01□□□□□ -0.97
CTCFL-206ENST00000426658 C19orf25Q9UFG5 118 aaPredicted RBP9.01□□□□□ -0.97
CTCFL-206ENST00000426658 OSGIN2Q9Y236 505 aa9.01□□□□□ -0.97
CTCFL-206ENST00000426658 IGKV1D-43A0A0B4J1Z2 117 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 CYB5BO43169 146 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 IGHV4-34P06331 123 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 LYL1P12980 280 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 HTR5AP47898 357 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 ZNF266Q14584 549 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 DHRS13Q6UX07 377 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 SPEM1Q8N4L4 309 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 TAAR9Q96RI9 348 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 PECRQ9BY49 303 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 AK3Q9UIJ7 227 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 PTRH2Q9Y3E5 179 aaKnown RBP9□□□□□ -0.97
CTCFL-206ENST00000426658 RALGAPA1Q6GYQ0 2036 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 A0A0A6YYD4 124 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 NSG1A0A0A6YYJ2 146 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 CTSDP07339 412 aaPredicted RBP9□□□□□ -0.97
CTCFL-206ENST00000426658 DANCRP0C864 163 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 NR2C1P13056 603 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 GALNSP34059 522 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 APOBEC1P41238 236 aaKnown RBP9□□□□□ -0.97
CTCFL-206ENST00000426658 P2RY1P47900 373 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 THEM4Q5T1C6 240 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 PLCXD3Q63HM9 321 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 EGLN1Q9GZT9 426 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 TREM2Q9NZC2 230 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 KCNS2Q9ULS6 477 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 A0A1W2PQD3 144 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 H3BP45 60 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 HPNP05981 417 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 OR5AC1P0C628 307 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 PI4KAP42356 2102 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 SSTP61278 116 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 QRFPP83859 136 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 CCDC71LQ8N9Z2 235 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 SMRP1Q8NCR6 262 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 DYRK2Q92630 601 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 SSX3Q99909 188 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 NECAP2Q9NVZ3 263 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 RCL1Q9Y2P8 373 aaKnown RBP9□□□□□ -0.97
CTCFL-206ENST00000426658 STARD10Q9Y365 291 aa9□□□□□ -0.97
CTCFL-206ENST00000426658 OR5H15A6NDH6 313 aa8.99□□□□□ -0.97
CTCFL-206ENST00000426658 ZNF724A8MTY0 619 aa8.99□□□□□ -0.97
CTCFL-206ENST00000426658 ZNF727A8MUV8 499 aa8.99□□□□□ -0.97
CTCFL-206ENST00000426658 ZNF239Q16600 458 aaKnown RBP8.99□□□□□ -0.97
CTCFL-206ENST00000426658 BEND4Q6ZU67 534 aa8.99□□□□□ -0.97
CTCFL-206ENST00000426658 RNF144BQ7Z419 303 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms