RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 SCN3AQ9NY46 2000 aa4.22□□□□□ -1.73
HMGB1P32-201ENST00000425971 IGKV1D-13A0A0B4J2D9 117 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 SMCO3A2RU48 225 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 ZNF726A6NNF4 738 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 PANO1I0J062 215 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 INSP01308 110 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 FGGP02679 453 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 IGKV1-13P0DP09 117 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 CRISP2P16562 243 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 ZNF17P17021 662 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 PRLHRP49683 370 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 FGF8P55075 233 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 SH3BGRP55822 239 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 ZNF92Q03936 586 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 RCAN2Q14206 197 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 LRRC10Q5BKY1 277 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 AP1ARQ63HQ0 302 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 RTL4Q6ZR62 310 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 THOC6Q86W42 341 aaKnown RBP4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 CNEP1R1Q8N9A8 125 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 TMEM35BQ8NCS4 154 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 PLPP5Q8NEB5 264 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 OR4F15Q8NGB8 312 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 OR1N2Q8NGR9 330 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 KCTD4Q8WVF5 259 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 C22orf15Q8WYQ4 148 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 TMEM54Q969K7 222 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 MCUR1Q96AQ8 359 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 LRRC58Q96CX6 371 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 ZIM3Q96PE6 472 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 PANX1Q96RD7 426 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 TRIB3Q96RU7 358 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 ATP5SQ99766 215 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 SH3GL3Q99963 347 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 RSPO3Q9BXY4 272 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 BPESC1Q9GZL8 116 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 DHX35Q9H5Z1 703 aaKnown RBP4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 ADAM22Q9P0K1 906 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 PITPNC1Q9UKF7 332 aa4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 YARS2Q9Y2Z4 477 aaKnown RBP4.21□□□□□ -1.74
HMGB1P32-201ENST00000425971 DYNC1H1Q14204 4646 aaKnown RBP4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 GLYATL1P3A0A0U1RQE8 302 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 RAB29O14966 203 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 CDH16O75309 829 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 EIF3GO75821 320 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 OR2J3O76001 311 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 TGM6O95932 706 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 HLA-DQB2P05538 268 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 GKN3PP0CG01 181 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 DUX4L4P0CJ87 422 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 IL1RNP18510 177 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 CD9P21926 228 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 SYKP43405 635 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 EFNA4P52798 201 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 RWDD2BP57060 319 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 LY6G6FQ5SQ64 297 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 NCMAPQ5T1S8 102 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 LCN12Q6JVE5 192 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 OR2G3Q8NGZ4 309 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 OR5K2Q8NHB8 316 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 RDH5Q92781 318 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 SGK3Q96BR1 496 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 JSRP1Q96MG2 331 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 TSNARE1Q96NA8 513 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 OR2M2Q96R28 347 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 NANOGQ9H9S0 305 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 PROK2Q9HC23 129 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 FGF20Q9NP95 211 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 NECAP2Q9NVZ3 263 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 DNAJC12Q9UKB3 198 aa4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 PACSIN2Q9UNF0 486 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P32-201ENST00000425971 WNK2Q9Y3S1 2297 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 HEATR5BQ9P2D3 2071 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 ZNF860A6NHJ4 632 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 H7C417 338 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 K7EIL1 84 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 MRPS12O15235 138 aaKnown RBP4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 RDH16O75452 317 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 EEDO75530 441 aaKnown RBP4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 TRAPPC6AO75865 159 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 CLPXO76031 633 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 OR2F2O95006 317 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 GIPP09681 153 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 DNAH10OSP0CZ25 163 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 IGHV3-43DP0DP04 118 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 HPGDP15428 266 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 PRTN3P24158 256 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 NAA10P41227 235 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 ATP5OP48047 213 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 MNAT1P51948 309 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 REG3AQ06141 175 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 BSPH1Q075Z2 132 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 MRPL23Q16540 153 aaKnown RBP4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 SGCAQ16586 387 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 PDIK1LQ8N165 341 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 FAM71E2Q8N5Q1 922 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 CCDC126Q96EE4 140 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 COL21A1Q96P44 957 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 CSPG4P5Q96PW8 444 aa4.19□□□□□ -1.74
HMGB1P32-201ENST00000425971 PEBP4Q96S96 227 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms