RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 NKAPLQ5M9Q1 402 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 SNX29P2Q8IUI4 249 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 TBC1D15Q8TC07 691 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 FN3KRPQ9HA64 309 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
PRPF39-202ENST00000424478 TMEM210A6NLX4 147 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 CYB5AP00167 134 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 IGHV4-39P01824 125 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 DAOP14920 347 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 MPZP25189 248 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 TNFSF8P32971 234 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 BPIFB2Q8N4F0 458 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 SPERTQ8NA61 448 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 OR4M1Q8NGD0 313 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 OR51T1Q8NGJ9 327 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 NRIP2Q9BQI9 281 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 TMEM59Q9BXS4 323 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 LPAR5Q9H1C0 372 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 TMEM14DPA8MWL7 114 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 PPOXP50336 477 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 FAM209AQ5JX71 171 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 CNIH2Q6PI25 160 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 MKXQ8IYA7 352 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 CHST6Q9GZX3 395 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 RAB1BQ9H0U4 201 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 SPATA2Q9UM82 520 aa11.29□□□□□ -0.6
PRPF39-202ENST00000424478 TEX15Q9BXT5 2789 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 SIRPB1O00241 398 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 OR7C1O76099 320 aaPredicted RBP11.28□□□□□ -0.6
PRPF39-202ENST00000424478 BPNT1O95861 308 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 GYPAP02724 150 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 TNFRSF1AP19438 455 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 RIN1Q13671 783 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 DCDC5Q6ZRR9 648 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 FAM58AQ8N1B3 248 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 OSR2Q8N2R0 312 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 NXF2Q9GZY0 626 aaKnown RBP11.28□□□□□ -0.6
PRPF39-202ENST00000424478 TLNRD1Q9H1K6 362 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 TMEM106BQ9NUM4 274 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 MYO9AB2RTY4 2548 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 MEIS3P1A6NDR6 274 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 RFPL4AA6NLU0 287 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 RFPL4AL1F8VTS6 287 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 CD55P08174 381 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 CDK2P24941 298 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 CHST4Q8NCG5 386 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 AP3S1Q92572 193 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 DIRAS2Q96HU8 199 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 PKIBQ9C010 78 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 EXTL2Q9UBQ6 330 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 DNAJB11Q9UBS4 358 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 ITPR3Q14573 2671 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 ISPDA4D126 451 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 GABRA2P47869 451 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 IKZF1Q13422 519 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 TESK1Q15569 626 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 ATAD3CQ5T2N8 411 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 SIGIRRQ6IA17 410 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 C6orf201Q7Z4U5 140 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 C5orf24Q7Z6I8 188 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 FAM90A1Q86YD7 464 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 OR6Q1Q8NGQ2 317 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 RDH5Q92781 318 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 ABRACLQ9P1F3 81 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 RNF7Q9UBF6 113 aa11.28□□□□□ -0.6
PRPF39-202ENST00000424478 TANC2Q9HCD6 1990 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 OVOL3O00110 214 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 ADH4P08319 380 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 GTF2F2P13984 249 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 GNB3P16520 340 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 ERVK11-1P61568 191 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 POC1AQ8NBT0 407 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 PXT1Q8NFP0 134 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 C14orf79Q96F83 325 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 HMG20AQ9NP66 347 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 POLDIP2Q9Y2S7 368 aa11.27□□□□□ -0.6
PRPF39-202ENST00000424478 WNK2Q9Y3S1 2297 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 A0A0G2JMP0 313 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 A0A0X1KG70 313 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 AMY2BP19961 511 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 GATA4P43694 442 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 ART1P52961 327 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 ATP5J2P56134 94 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 HFEQ30201 348 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 PLAC9Q5JTB6 97 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 ASCL4Q6XD76 172 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 ACP7Q6ZNF0 438 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 C20orf204Q6ZNR8 217 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 OR4M2Q8NGB6 313 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 IGFBPL1Q8WX77 278 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 CST11Q9H112 138 aa11.27□□□□□ -0.61
PRPF39-202ENST00000424478 NOP16Q9Y3C1 178 aaKnown RBP11.27□□□□□ -0.61
PRPF39-202ENST00000424478 TRAV39A0A0B4J263 110 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 SRRM5B3KS81 715 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 TMEM178BH3BS89 294 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 PPIHO43447 177 aaKnown RBP11.26□□□□□ -0.61
PRPF39-202ENST00000424478 ZNF44P15621 663 aa11.26□□□□□ -0.61
PRPF39-202ENST00000424478 RBM11P57052 281 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms