RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 CNTD2Q9H8S5 307 aa14.19□□□□□ -0.14
FOXN4-203ENST00000423960 ELL3Q9HB65 397 aaPredicted RBP14.19□□□□□ -0.14
FOXN4-203ENST00000423960 RHOFQ9HBH0 211 aa14.19□□□□□ -0.14
FOXN4-203ENST00000423960 TXNL4BQ9NX01 149 aaKnown RBP14.19□□□□□ -0.14
FOXN4-203ENST00000423960 ING4Q9UNL4 249 aa14.19□□□□□ -0.14
FOXN4-203ENST00000423960 GSTK1Q9Y2Q3 226 aa14.19□□□□□ -0.14
FOXN4-203ENST00000423960 TRAV1-2A0A0B4J238 106 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 RFPL4AA6NLU0 287 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 F5H0A9 414 aaPredicted RBP14.18□□□□□ -0.14
FOXN4-203ENST00000423960 RFPL4AL1F8VTS6 287 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 KNG1P01042 644 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 IGHV4-31P0DP07 118 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 GADD45AP24522 165 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 PRDX2P32119 198 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 GABRA2P47869 451 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 RSU1Q15404 277 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 CYB5R2Q6BCY4 276 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 NLRC3Q7RTR2 1065 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 LYPD6Q86Y78 171 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 OR8B3Q8NGG8 313 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 OR8B2Q96RD0 313 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 CHCHD6Q9BRQ6 235 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 DNTTIP1Q9H147 329 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 METTL9Q9H1A3 318 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 HMG20AQ9NP66 347 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 RBFOX1Q9NWB1 397 aaKnown RBP14.18□□□□□ -0.14
FOXN4-203ENST00000423960 KAAG1Q9UBP8 84 aa14.18□□□□□ -0.14
FOXN4-203ENST00000423960 IGKV1D-17A0A075B6S4 117 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 FAM157AC9JC47 383 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 TMPRSS2O15393 492 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 CDRT1O95170 752 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 SFTPBP07988 381 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 CALCBP10092 127 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 CD37P11049 281 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 PRKACAP17612 351 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 AMY2BP19961 511 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 MYL9P24844 172 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 PSMD7P51665 324 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 BMXP51813 675 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 TIMM50Q3ZCQ8 353 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 FIP1L1Q6UN15 594 aaKnown RBP14.17□□□□□ -0.14
FOXN4-203ENST00000423960 SLC36A1Q7Z2H8 476 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 LINC01356Q8N9X3 169 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 MED30Q96HR3 178 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 PCDHB16Q9NRJ7 776 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 MRPS28Q9Y2Q9 187 aaKnown RBP14.17□□□□□ -0.14
FOXN4-203ENST00000423960 AK6Q9Y3D8 172 aaKnown RBP14.17□□□□□ -0.14
FOXN4-203ENST00000423960 ZANQ9Y493 2812 aa14.17□□□□□ -0.14
FOXN4-203ENST00000423960 LOC100506127A0A0U1RQW1 187 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 NKX6-3A6NJ46 265 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 B4DSR2 109 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 PDCD5O14737 125 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 TFF1P04155 84 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 TFAP2AP05549 437 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 PITPNBP48739 271 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 ESCO2Q56NI9 601 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 C1orf100Q5SVJ3 147 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 ELP2Q6IA86 826 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 GLIPR1L1Q6UWM5 242 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 ZNF841Q6ZN19 808 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 GDPGP1Q6ZNW5 385 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 ZNF788Q6ZQV5 615 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 CD177Q8N6Q3 437 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 OR4D6Q8NGJ1 314 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 OR13F1Q8NGS4 319 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 OR10K1Q8NGX5 313 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 MSI2Q96DH6 328 aaKnown RBP14.16□□□□□ -0.14
FOXN4-203ENST00000423960 IL36GQ9NZH8 169 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 CTSZQ9UBR2 303 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 OR14J1Q9UGF5 321 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 GLS2Q9UI32 602 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 ZNF222Q9UK12 451 aa14.16□□□□□ -0.14
FOXN4-203ENST00000423960 NSD1Q96L73 2696 aaPredicted RBP14.15□□□□□ -0.14
FOXN4-203ENST00000423960 INAFM1C9JVW0 142 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 SIGLEC5O15389 551 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 ZNF780AO75290 641 aaPredicted RBP14.15□□□□□ -0.14
FOXN4-203ENST00000423960 FOXH1O75593 365 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 HTR3BO95264 441 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 ALDH3B2P48448 385 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 MTNR1BP49286 362 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 SEC61A1P61619 476 aaKnown RBP14.15□□□□□ -0.14
FOXN4-203ENST00000423960 GNB2P62879 340 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 GPR176Q14439 515 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 ZNF146Q15072 292 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 KRTAP21-3Q3LHN1 58 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 WDR25Q64LD2 544 aaPredicted RBP14.15□□□□□ -0.14
FOXN4-203ENST00000423960 AWAT2Q6E213 333 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 Q8NFD4 153 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 SDSLQ96GA7 329 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 KCTD7Q96MP8 289 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 GAFA1Q96PS6 74 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 GFI1Q99684 422 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 SSBP3Q9BWW4 388 aaPredicted RBP14.15□□□□□ -0.14
FOXN4-203ENST00000423960 SEBOXQ9HB31 216 aaPredicted RBP14.15□□□□□ -0.14
FOXN4-203ENST00000423960 LPAR2Q9HBW0 351 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 IL36RNQ9UBH0 155 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 CLN8Q9UBY8 286 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 V9GY05 133 aa14.15□□□□□ -0.14
FOXN4-203ENST00000423960 SHISA3A0PJX4 238 aa14.14□□□□□ -0.15
FOXN4-203ENST00000423960 DVL1O14640 695 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms