RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 DCDC5Q6ZRR9 648 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 TPRA1Q86W33 373 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 NR2C2APQ86WQ0 139 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 FAM58AQ8N1B3 248 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 OR6M1Q8NGM8 313 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 TBC1D15Q8TC07 691 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 C1orf147Q96MC9 270 aaPredicted RBP14.2□□□□□ -0.14
COL7A1-202ENST00000422991 IL36RNQ9UBH0 155 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 V9GY05 133 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 ACANP16112 2415 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 A0A0G2JK05 382 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 OR2AT4A6NND4 320 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 F5H0A9 414 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-202ENST00000422991 H7C1Q1 480 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 TNFRSF13BO14836 293 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-202ENST00000422991 KNG1P01042 644 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 PSG2P11465 335 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 FOSL1P15407 271 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 CFPP27918 469 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 HTR2CP28335 458 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 SDC2P34741 201 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 TGFBR1P36897 503 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 PSMD7P51665 324 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 LMO4P61968 165 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 RSU1Q15404 277 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 CTF1Q16619 201 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 ELP2Q6IA86 826 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 GLIPR1L1Q6UWM5 242 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 Q8NFD4 153 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 OR10K1Q8NGX5 313 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 ANGPTL6Q8NI99 470 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 S100A13Q99584 98 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 METTL9Q9H1A3 318 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 ELL3Q9HB65 397 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-202ENST00000422991 PLGRKTQ9HBL7 147 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 HMG20AQ9NP66 347 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 ZNF222Q9UK12 451 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 ING4Q9UNL4 249 aa14.19□□□□□ -0.14
COL7A1-202ENST00000422991 YLPM1P49750 1951 aaKnown RBP14.18□□□□□ -0.14
COL7A1-202ENST00000422991 IGKV1D-17A0A075B6S4 117 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 SMIM30A4D0T7 59 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 NDUFA2O43678 99 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 CLEC2LP0C7M8 214 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 PRKACAP17612 351 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 IL2RGP31785 369 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 BMXP51813 675 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 FGF12P61328 243 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 NCS1P62166 190 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 RAB11BQ15907 218 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 DGUOKQ16854 277 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 ATPAF1Q5TC12 328 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-202ENST00000422991 LYPD2Q6UXB3 125 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 CLVS1Q8IUQ0 354 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-202ENST00000422991 CIARTQ8N365 385 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-202ENST00000422991 MAPK1IP1LQ8NDC0 245 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 OR5T2Q8NGG2 359 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 SLC25A28Q96A46 364 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 COX4I2Q96KJ9 171 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 DNTTIP1Q9H147 329 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 ZNF665Q9H7R5 613 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 PATZ1Q9HBE1 687 aaKnown RBP14.18□□□□□ -0.14
COL7A1-202ENST00000422991 MIOXQ9UGB7 285 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 PCDHB10Q9UN67 800 aa14.18□□□□□ -0.14
COL7A1-202ENST00000422991 NKX6-3A6NJ46 265 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 RFPL4AA6NLU0 287 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 IFITM5A6NNB3 132 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 NOTOA8MTQ0 251 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 RFPL4AL1F8VTS6 287 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 ADAM20O43506 726 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 ZNF780AO75290 641 aaPredicted RBP14.17□□□□□ -0.14
COL7A1-202ENST00000422991 HTR3BO95264 441 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 TFF1P04155 84 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 UBBP0CG47 229 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 CALCBP10092 127 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 RPS2P15880 293 aaKnown RBP14.17□□□□□ -0.14
COL7A1-202ENST00000422991 AMY2BP19961 511 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 SERPINA2P20848 420 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 VBP1P61758 197 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 MXD1Q05195 221 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 SLC22A6Q4U2R8 563 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 SPIN3Q5JUX0 258 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 FIP1L1Q6UN15 594 aaKnown RBP14.17□□□□□ -0.14
COL7A1-202ENST00000422991 RAB39BQ96DA2 213 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 GAFA1Q96PS6 74 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 CCL13Q99616 98 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 KAAG1Q9UBP8 84 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 CTSZQ9UBR2 303 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 GHRLQ9UBU3 117 aa14.17□□□□□ -0.14
COL7A1-202ENST00000422991 A0A1B0GW55 424 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 A0A1W2PP11 408 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 AIPO00170 330 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 BPNT1O95861 308 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 HEXAP06865 529 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 WNT2P09544 360 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 DUX4L2P0CJ85 424 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 DUX4L3P0CJ86 424 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 DUX4L4P0CJ87 422 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 DUX4L5P0CJ88 424 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 DUX4L6P0CJ89 424 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 DUX4L7P0CJ90 424 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms