RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 SIGLEC5O15389 551 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 KNG1P01042 644 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 IGKV1D-12P01611 117 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 TMEM225BP0DP42 221 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 SELLP14151 372 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 BCL3P20749 454 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 PSMA1P25786 263 aaKnown RBP17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 GABRA2P47869 451 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 IL13RA1P78552 427 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 TRAM1Q15629 374 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 CR1LQ2VPA4 569 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 ARMCX4Q5H9R4 360 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 DCAF12L2Q5VW00 463 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 SATL1Q86VE3 508 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 ZSCAN4Q8NAM6 433 aaPredicted RBP17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 OR4M2Q8NGB6 313 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 TMEM203Q969S6 136 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 MED30Q96HR3 178 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 GPER1Q99527 375 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 MMP26Q9NRE1 261 aa17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 RBFOX1Q9NWB1 397 aaKnown RBP17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 SF3B6Q9Y3B4 125 aaKnown RBP17.15■□□□□ 0.34
HMGXB4-203ENST00000420166 NIPBLQ6KC79 2804 aaeCLIP17.14■□□□□ 0.335e-6■□□□□ 10.2
HMGXB4-203ENST00000420166 MAGEA13PA6NCF6 341 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 GABRPO00591 440 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 KDM4BO94953 1096 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 GATA3P23771 443 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 NPBWR2P48146 333 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 PAX2Q02962 417 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 SSX1Q16384 188 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 FAM27D1Q5T7N8 215 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 CEACAM19Q7Z692 300 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 CD177Q8N6Q3 437 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 EMG1Q92979 244 aaKnown RBP17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 SDSLQ96GA7 329 aa17.14■□□□□ 0.33
HMGXB4-203ENST00000420166 LOC105371242A0A075B767 164 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 C22orf46C9J442 243 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 NDUFB3O43676 98 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 TNFAIP8O95379 198 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 GABRA5P31644 462 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 PRDX2P32119 198 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 ZNF93P35789 620 aaPredicted RBP17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 IKZF1Q13422 519 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 FAM120AOSQ5T036 256 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 FAHD2BQ6P2I3 314 aaPredicted RBP17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 TMEM91Q6ZNR0 172 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 FAM58AQ8N1B3 248 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 FGFRL1Q8N441 504 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 TNFAIP8L1Q8WVP5 186 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 ST8SIA4Q92187 359 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 DACT3Q96B18 629 aaPredicted RBP17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 FAHD2AQ96GK7 314 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 NKX3-1Q99801 234 aaPredicted RBP17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 OR14J1Q9UGF5 321 aa17.13■□□□□ 0.33
HMGXB4-203ENST00000420166 IGHV2-70DA0A0C4DH43 119 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 J3QLI3 93 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 RGS9O75916 674 aaPredicted RBP17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 MAS1P04201 325 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 UCHL1P09936 223 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 PSMB9P28065 219 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 OR3A4PP47883 348 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 CEBPDP49716 269 aaPredicted RBP17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 GP2P55259 537 aaKnown RBP17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 DGUOKQ16854 277 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 LRRC10Q5BKY1 277 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 CD276Q5ZPR3 534 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 PXT1Q8NFP0 134 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 RAB40AQ8WXH6 277 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 RHOFQ9HBH0 211 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 HMG20AQ9NP66 347 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 NDUFB11Q9NX14 153 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 IL36RNQ9UBH0 155 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 CDC42EP3Q9UKI2 254 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 MAB21L2Q9Y586 359 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 INSIG2Q9Y5U4 225 aa17.12■□□□□ 0.33
HMGXB4-203ENST00000420166 NAV3Q8IVL0 2385 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 CRLF1O75462 422 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 SFTPBP07988 381 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 PRKACAP17612 351 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 PTGFRP43088 359 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 FABP5Q01469 135 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 C11orf91Q3C1V1 193 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 FIP1L1Q6UN15 594 aaKnown RBP17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 C1QL2Q7Z5L3 287 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 ZNF561Q8N587 486 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 NKAIN3Q8N8D7 197 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 PNLDC1Q8NA58 520 aaKnown RBP17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 ZNRF1Q8ND25 227 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 PHYHIPQ92561 330 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 NUDT16L1Q9BRJ7 211 aaKnown RBP17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 TMPRSS13Q9BYE2 586 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 FAM192AQ9GZU8 254 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 SHARPINQ9H0F6 387 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 PPIL3Q9H2H8 161 aaKnown RBP17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 TCF7L1Q9HCS4 588 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 SLC25A10Q9UBX3 287 aaPredicted RBP17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 LPAR3Q9UBY5 353 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 METRNQ9UJH8 293 aa17.11■□□□□ 0.33
HMGXB4-203ENST00000420166 MEGF11A6BM72 1044 aa17.1■□□□□ 0.33
HMGXB4-203ENST00000420166 GPR37O15354 613 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms