RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 ABCG5Q9H222 651 aa7.1□□□□□ -1.27
RBM39-208ENST00000416108 MIXL1Q9H2W2 232 aa7.1□□□□□ -1.27
RBM39-208ENST00000416108 PLEKHF2Q9H8W4 249 aa7.1□□□□□ -1.27
RBM39-208ENST00000416108 GCM1Q9NP62 436 aa7.1□□□□□ -1.27
RBM39-208ENST00000416108 DLL4Q9NR61 685 aa7.1□□□□□ -1.27
RBM39-208ENST00000416108 RBFOX1Q9NWB1 397 aaKnown RBP7.1□□□□□ -1.27
RBM39-208ENST00000416108 RASL12Q9NYN1 266 aa7.1□□□□□ -1.27
RBM39-208ENST00000416108 TREM2Q9NZC2 230 aa7.1□□□□□ -1.27
RBM39-208ENST00000416108 MTCH1Q9NZJ7 389 aa7.1□□□□□ -1.27
RBM39-208ENST00000416108 ST3GAL6Q9Y274 331 aa7.1□□□□□ -1.27
RBM39-208ENST00000416108 NPTNQ9Y639 398 aa7.1□□□□□ -1.27
RBM39-208ENST00000416108 SPTAN1Q13813 2472 aaKnown RBP7.09□□□□□ -1.27
RBM39-208ENST00000416108 NKX6-3A6NJ46 265 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 SRRM5B3KS81 715 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 CLDN25C9JDP6 229 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 NOS1APO75052 506 aaPredicted RBP7.09□□□□□ -1.27
RBM39-208ENST00000416108 OR7C1O76099 320 aaPredicted RBP7.09□□□□□ -1.27
RBM39-208ENST00000416108 CYB5R3P00387 301 aaPredicted RBP7.09□□□□□ -1.27
RBM39-208ENST00000416108 HPXP02790 462 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 ZNF44P15621 663 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 BLVRBP30043 206 aaPredicted RBP7.09□□□□□ -1.27
RBM39-208ENST00000416108 CD80P33681 288 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 NR4A2P43354 598 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 VEGFCP49767 419 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 RBM11P57052 281 aaKnown RBP7.09□□□□□ -1.27
RBM39-208ENST00000416108 RPS27AP62979 156 aaKnown RBP7.09□□□□□ -1.27
RBM39-208ENST00000416108 MRPS15P82914 257 aaKnown RBP7.09□□□□□ -1.27
RBM39-208ENST00000416108 QRFPP83859 136 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 ZNF45Q02386 682 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 SCN1BQ07699 218 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 LSAMPQ13449 338 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 KCNJ8Q15842 424 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 ZNF181Q2M3W8 571 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 SPIN3Q5JUX0 258 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 NKAPLQ5M9Q1 402 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 ATAD3CQ5T2N8 411 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 PYHIN1Q6K0P9 492 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 ACP7Q6ZNF0 438 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 C11orf53Q8IXP5 236 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 TMEM104Q8NE00 496 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 OR4M1Q8NGD0 313 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 OR10R2Q8NGX6 335 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 NEK7Q8TDX7 302 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 RDH5Q92781 318 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 SLC25A38Q96DW6 304 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 TIMD4Q96H15 378 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 POM121Q96HA1 1249 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 Q96M66 194 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 C1orf147Q96MC9 270 aaPredicted RBP7.09□□□□□ -1.27
RBM39-208ENST00000416108 NEDD4LQ96PU5 975 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 TM2D1Q9BX74 207 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 LPAR5Q9H1C0 372 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 SPACA1Q9HBV2 294 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 TMEM106BQ9NUM4 274 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 NLKQ9UBE8 527 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 OR14J1Q9UGF5 321 aa7.09□□□□□ -1.27
RBM39-208ENST00000416108 MRPS7Q9Y2R9 242 aaKnown RBP7.09□□□□□ -1.27
RBM39-208ENST00000416108 UBR5O95071 2799 aaPredicted RBP7.08□□□□□ -1.28
RBM39-208ENST00000416108 TRAV18A0A075B6X5 111 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 PPIAL4EA0A075B759 164 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 TRAV38-1A0A0B4J264 116 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A10PA6NDY2 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A18PA6NE21 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A16PA6NEW6 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A20PA6NIJ5 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A8PA6NJQ4 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A7PA6NKC0 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A22PA8MWA6 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A12PA8MX19 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A5PA8MXJ8 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A23PA8MXZ1 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 PPIAL4DF5H284 164 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 SH2D1BO14796 132 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 GEMIN2O14893 280 aaKnown RBP7.08□□□□□ -1.28
RBM39-208ENST00000416108 DEGS1O15121 323 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 XRCC3O43542 346 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 KNG1P01042 644 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A15PP0C7V4 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A13PP0C7W8 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A14PP0C7W9 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 FAM90A24PP0C7X0 464 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 PPIAL4FP0DN26 164 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 DAOP14920 347 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 MUC1P15941 1255 aaPredicted RBP7.08□□□□□ -1.28
RBM39-208ENST00000416108 EGR1P18146 543 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 CDK2P24941 298 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 PTBP1P26599 531 aaKnown RBP eCLIP7.08□□□□□ -1.28
RBM39-208ENST00000416108 CFHR2P36980 270 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 GABRA2P47869 451 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 INPP1P49441 399 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 EFNA4P52798 201 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 EFNB2P52799 333 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 ERVK11-1P61568 191 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 MRPS11P82912 194 aaKnown RBP7.08□□□□□ -1.28
RBM39-208ENST00000416108 PLA2G7Q13093 441 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 MADCAM1Q13477 382 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 ARFRP1Q13795 201 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 CARTPTQ16568 116 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 TAF9Q16594 264 aa7.08□□□□□ -1.28
RBM39-208ENST00000416108 MICBQ29980 383 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms