RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 SEC16AO15027 2179 aa10.52□□□□□ -0.72
PTPRF-205ENST00000414879 GCM2O75603 506 aaPredicted RBP10.52□□□□□ -0.72
PTPRF-205ENST00000414879 DUS4LO95620 317 aaKnown RBP10.52□□□□□ -0.72
PTPRF-205ENST00000414879 BAP18Q8IXM2 172 aa10.52□□□□□ -0.72
PTPRF-205ENST00000414879 TMEM217Q8N7C4 229 aa10.52□□□□□ -0.72
PTPRF-205ENST00000414879 UCN2Q96RP3 112 aa10.52□□□□□ -0.72
PTPRF-205ENST00000414879 SAV1Q9H4B6 383 aaPredicted RBP10.52□□□□□ -0.72
PTPRF-205ENST00000414879 ARID1BQ8NFD5 2236 aaPredicted RBP10.52□□□□□ -0.73
PTPRF-205ENST00000414879 TRDCB7Z8K6 153 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 PDGFBP01127 241 aaPredicted RBP10.52□□□□□ -0.73
PTPRF-205ENST00000414879 ARL3P36405 182 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 CSN1S1P47710 185 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 OR8G2PQ6IF36 304 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 PPP1R32Q7Z5V6 425 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 TCEAL7Q9BRU2 100 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 MARVELD1Q9BSK0 173 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 PECRQ9BY49 303 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 LINC00470Q9BZP3 86 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 PCDHGA9Q9Y5G4 932 aaKnown RBP10.52□□□□□ -0.73
PTPRF-205ENST00000414879 A0A1B0GVG6 124 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 CDX4O14627 284 aaPredicted RBP10.52□□□□□ -0.73
PTPRF-205ENST00000414879 PGA4P0DJD7 388 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 SCGB2A2Q13296 93 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 NRN1LQ496H8 165 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 C1QTNF12Q5T7M4 302 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 TEX29Q8N6K0 151 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 HPSE2Q8WWQ2 592 aa10.52□□□□□ -0.73
PTPRF-205ENST00000414879 CEP290O15078 2479 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 MDFIC2A0A1B0GVS7 189 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 SIX6O95475 246 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 FGF2P09038 288 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 RPA2P15927 270 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 CTSSP25774 331 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 CALCRP30988 508 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 OR3A4PP47883 348 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 SFXN3Q9BWM7 321 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 RNF32Q9H0A6 362 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 SERTAD4Q9NUC0 356 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 ST6GALNAC2Q9UJ37 374 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 UNC13CQ8NB66 2214 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 FAM221AA4D161 298 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 MASP2O00187 686 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 GPANK1O95872 356 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 MT-ND4LP03901 98 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 CPN1P15169 458 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 OR2B8PP59922 312 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 SNRPNP63162 240 aaKnown RBP10.51□□□□□ -0.73
PTPRF-205ENST00000414879 BTNL3Q6UXE8 466 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 NFAM1Q8NET5 270 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-205ENST00000414879 TMEM45BQ96B21 275 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 NAA60Q9H7X0 242 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 C4orf51C9J302 202 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 GNB2P62879 340 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 NKX6-1P78426 367 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-205ENST00000414879 ATP6V1FQ16864 119 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 SPANXN5Q5MJ07 72 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 HIST2H3AQ71DI3 136 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 ORAI1Q96D31 301 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 ZNF665Q9H7R5 613 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 ANXA10Q9UJ72 324 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 NPTNQ9Y639 398 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 RRASP10301 218 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 ZNF674Q2M3X9 581 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 TSPO2Q5TGU0 170 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 FDX2Q6P4F2 183 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 TIPARPQ7Z3E1 657 aaKnown RBP10.51□□□□□ -0.73
PTPRF-205ENST00000414879 ST8SIA4Q92187 359 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 GPA33Q99795 319 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 CACNA1CQ13936 2221 aa10.51□□□□□ -0.73
PTPRF-205ENST00000414879 A0A1B0GTH9 108 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 PYCARD-AS1I3L0S3 204 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 TGOLN2O43493 480 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 BCL2L11O43521 198 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 CEACAM6P40199 344 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 CD200P41217 278 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 MUC20Q8N307 709 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-205ENST00000414879 OR8B3Q8NGG8 313 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 FAM131CQ96AQ9 280 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 OR8B2Q96RD0 313 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 CHRDL1Q9BU40 450 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 DUXBA0A1W2PPF3 345 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 TMEM229AB2RXF0 380 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 M0R1X1 148 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 CCSO14618 274 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 CBR1P16152 277 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 TMEM30BQ3MIR4 351 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 OTPQ5XKR4 325 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 ZBTB44Q8NCP5 570 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 OR5T1Q8NG75 326 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 ZNF519Q8TB69 540 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 RPEQ96AT9 228 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 ZNF385AQ96PM9 386 aaKnown RBP10.5□□□□□ -0.73
PTPRF-205ENST00000414879 TINAGL1Q9GZM7 467 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-205ENST00000414879 STARD10Q9Y365 291 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 LOC102723996A0A087X1L8 192 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 CENPVL1A0A0U1RR11 272 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 NPIPB9F8W1W9 429 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 PDZK1IP1Q13113 114 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 C10orf128Q5T292 105 aa10.5□□□□□ -0.73
PTPRF-205ENST00000414879 KCNRGQ8N5I3 272 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms