RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 SETD9Q8NE22 299 aa12.88□□□□□ -0.35
MCF2L-211ENST00000413354 OR52I1Q8NGK6 324 aa12.88□□□□□ -0.35
MCF2L-211ENST00000413354 APH1BQ8WW43 257 aa12.88□□□□□ -0.35
MCF2L-211ENST00000413354 SLAMF9Q96A28 289 aa12.88□□□□□ -0.35
MCF2L-211ENST00000413354 FGGYQ96C11 551 aa12.88□□□□□ -0.35
MCF2L-211ENST00000413354 OPALINQ96PE5 141 aa12.88□□□□□ -0.35
MCF2L-211ENST00000413354 JAM3Q9BX67 310 aa12.88□□□□□ -0.35
MCF2L-211ENST00000413354 MTCH1Q9NZJ7 389 aa12.88□□□□□ -0.35
MCF2L-211ENST00000413354 A0A0U1RQK1 487 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 RNASEK-C17orf49H0YIS7 233 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 NPFFO15130 113 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 MT-ND2P03891 347 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 TK1P04183 234 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 POU3F4P49335 361 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 MTCP1P56278 107 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 ACSM1Q08AH1 577 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 RCN1Q15293 331 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 ZNF691Q5VV52 312 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 ASCC1Q8N9N2 400 aaKnown RBP12.87□□□□□ -0.35
MCF2L-211ENST00000413354 CYGBQ8WWM9 190 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 TNFRSF14Q92956 283 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 EMG1Q92979 244 aaKnown RBP12.87□□□□□ -0.35
MCF2L-211ENST00000413354 DPAGT1Q9H3H5 408 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 SEBOXQ9HB31 216 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-211ENST00000413354 FGF20Q9NP95 211 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-211ENST00000413354 C19orf12Q9NSK7 152 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 GLS2Q9UI32 602 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 SF3B6Q9Y3B4 125 aaKnown RBP12.87□□□□□ -0.35
MCF2L-211ENST00000413354 TENM1Q9UKZ4 2725 aa12.87□□□□□ -0.35
MCF2L-211ENST00000413354 IGKV1-9A0A0C4DH69 117 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 TRBV2A0A0J9YWF9 115 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 A0A1B0GUS0 222 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 BTBD17A6NE02 478 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 K7N7A8 449 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 WBP4O75554 376 aaKnown RBP12.86□□□□□ -0.35
MCF2L-211ENST00000413354 PAHP00439 452 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 DCKP27707 260 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 COL10A1Q03692 680 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 KLRD1Q13241 179 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 MED21Q13503 144 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 LRRC36Q1X8D7 754 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 OR51A4Q8NGJ6 313 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 OR5AK2Q8NH90 309 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 DYRK2Q92630 601 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 ZNF649Q9BS31 505 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 ZNF747Q9BV97 191 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 ISG20L2Q9H9L3 353 aaKnown RBP12.86□□□□□ -0.35
MCF2L-211ENST00000413354 TNFRSF19Q9NS68 423 aa12.86□□□□□ -0.35
MCF2L-211ENST00000413354 MEIOCA2RUB1 952 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 FAM181BA6NEQ2 426 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 POM121CA8CG34 1229 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 ZFPL1O95159 310 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 MYL12AP19105 171 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 PEX2P28328 305 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 SAA4P35542 130 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 IER3P46695 156 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 IL18R1Q13478 541 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 MIDNQ504T8 468 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 SHISA2Q6UWI4 295 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 TMPRSS11AQ6ZMR5 421 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 GDPD3Q7L5L3 318 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 OR8H2Q8N162 312 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 FAM58AQ8N1B3 248 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 DHRSXQ8N5I4 330 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 OR5D14Q8NGL3 314 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 OR13C9Q8NGT0 318 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 OR10AC1Q8NH08 325 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 OR4F5Q8NH21 305 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 TSEN15Q8WW01 171 aaKnown RBP12.85□□□□□ -0.35
MCF2L-211ENST00000413354 CPNE2Q96FN4 548 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-211ENST00000413354 SNX22Q96L94 193 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 CHIAQ9BZP6 476 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 HEXA-AS1Q9H8Q6 139 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 RHOFQ9HBH0 211 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 ZNRD1Q9P1U0 126 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 DHDHQ9UQ10 334 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 EXOSC1Q9Y3B2 195 aaKnown RBP12.85□□□□□ -0.35
MCF2L-211ENST00000413354 PCDHGB5Q9Y5G0 923 aa12.85□□□□□ -0.35
MCF2L-211ENST00000413354 ANGPTL7O43827 346 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 ZNF737O75373 536 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 INMTO95050 263 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 ALX3O95076 343 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 HAND1O96004 215 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 LIMS3P0CW19 117 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 LIMS4P0CW20 117 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 ERVFRD-1P60508 538 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 PDZK1IP1Q13113 114 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 SMN1Q16637 294 aaKnown RBP12.84□□□□□ -0.35
MCF2L-211ENST00000413354 CCDC58Q4VC31 144 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 SPIN3Q5JUX0 258 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 TMEM200BQ69YZ2 307 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 GDPGP1Q6ZNW5 385 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 SERPINA12Q8IW75 414 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 PARP16Q8N5Y8 322 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 ZSCAN4Q8NAM6 433 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-211ENST00000413354 OR4M1Q8NGD0 313 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 PPP1R35Q8TAP8 253 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms