RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 AFF3P51826 1226 aaKnown RBP15.35■□□□□ 0.05
SDCBP-202ENST00000413219 MTCP1P56278 107 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 RAB2AP61019 212 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 NHLH2Q02577 135 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 GNMTQ14749 295 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 RSU1Q15404 277 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 TMEM176BQ3YBM2 270 aaPredicted RBP15.35■□□□□ 0.05
SDCBP-202ENST00000413219 HIKESHIQ53FT3 197 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 PPP1R3BQ86XI6 285 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 CCDC71LQ8N9Z2 235 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 OR10G3Q8NGC4 313 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 OR4D5Q8NGN0 318 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 NABP1Q96AH0 204 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 ZNF799Q96GE5 643 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 RCL1Q9Y2P8 373 aaKnown RBP15.35■□□□□ 0.05
SDCBP-202ENST00000413219 DMRT1Q9Y5R6 373 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 CDH23Q9H251 3354 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 YKT6O15498 198 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 ZFAND5O76080 213 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 SFTPDP35247 375 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 ZNF266Q14584 549 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 ASCL4Q6XD76 172 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 TMEM182Q6ZP80 229 aaPredicted RBP15.34■□□□□ 0.05
SDCBP-202ENST00000413219 FADS6Q8N9I5 356 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 OR52M1Q8NGK5 317 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 SPTSSAQ969W0 71 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 MOB3AQ96BX8 217 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 MUCL1Q96DR8 90 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 MARS2Q96GW9 593 aaKnown RBP15.34■□□□□ 0.05
SDCBP-202ENST00000413219 BOD1Q96IK1 185 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 WDR77Q9BQA1 342 aaPredicted RBP15.34■□□□□ 0.05
SDCBP-202ENST00000413219 TOLLIPQ9H0E2 274 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 C11orf1Q9H5F2 150 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 NXT1Q9UKK6 140 aaKnown RBP15.34■□□□□ 0.05
SDCBP-202ENST00000413219 A0A087WWC5 75 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 RRADP55042 308 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 NXPH1P58417 271 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 EWSR1Q01844 656 aaKnown RBP eCLIP15.34■□□□□ 0.05
SDCBP-202ENST00000413219 TAF9Q16594 264 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 FAM69BQ5VUD6 431 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 DEFB119Q8N690 84 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 WDSUB1Q8N9V3 476 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 TSTD1Q8NFU3 115 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 TPSD1Q9BZJ3 242 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 GPR173Q9NS66 373 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 MYOTQ9UBF9 498 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 TCFL5Q9UL49 500 aa15.34■□□□□ 0.05
SDCBP-202ENST00000413219 CCDC187A0A096LP49 1063 aa15.33■□□□□ 0.04
SDCBP-202ENST00000413219 TERTO14746 1132 aaKnown RBP15.33■□□□□ 0.04
SDCBP-202ENST00000413219 CDS2O95674 445 aa15.33■□□□□ 0.04
SDCBP-202ENST00000413219 KLK2P20151 261 aa15.33■□□□□ 0.04
SDCBP-202ENST00000413219 OPRM1P35372 400 aa15.33■□□□□ 0.04
SDCBP-202ENST00000413219 SRPXP78539 464 aa15.33■□□□□ 0.04
SDCBP-202ENST00000413219 CNN3Q15417 329 aaKnown RBP15.33■□□□□ 0.04
SDCBP-202ENST00000413219 SHBQ15464 509 aa15.33■□□□□ 0.04
SDCBP-202ENST00000413219 WDR74Q6RFH5 385 aaPredicted RBP15.33■□□□□ 0.04
SDCBP-202ENST00000413219 NOSIPQ9Y314 301 aaKnown RBP15.33■□□□□ 0.04
SDCBP-202ENST00000413219 RBFOX3A6NFN3 312 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 PITX3O75364 302 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 PIAS2O75928 621 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 FXYD4P59646 89 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 H3F3AP84243 136 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 KIAA0141Q14154 515 aaPredicted RBP15.32■□□□□ 0.04
SDCBP-202ENST00000413219 SHHQ15465 462 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 PHLDA2Q53GA4 152 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 OR5L1Q8NGL2 311 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 SGK3Q96BR1 496 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 GGACTQ9BVM4 153 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 ZNF286AQ9HBT8 521 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 PUS1Q9Y606 427 aaKnown RBP eCLIP15.32■□□□□ 0.04
SDCBP-202ENST00000413219 DHHO43323 396 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 GLB1P16278 677 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 CDX1P47902 265 aaPredicted RBP15.32■□□□□ 0.04
SDCBP-202ENST00000413219 OR8B8Q15620 311 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 NKAIN1Q4KMZ8 207 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 TSPO2Q5TGU0 170 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 OR2C3Q8N628 320 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 OR14L1PQ8NHC6 308 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 MR1Q95460 341 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 ABHD14BQ96IU4 210 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 KIAA1456Q9P272 454 aa15.32■□□□□ 0.04
SDCBP-202ENST00000413219 ZNF729A6NN14 1252 aaPredicted RBP15.31■□□□□ 0.04
SDCBP-202ENST00000413219 OR2J2O76002 312 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 PHYHD1Q5SRE7 291 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 NCMAPQ5T1S8 102 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 SLC22A25Q6T423 547 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 FAM185AQ8N0U4 392 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 FBXL14Q8N1E6 418 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 OR2G3Q8NGZ4 309 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 BCO1Q9HAY6 547 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 PTRH2Q9Y3E5 179 aaKnown RBP15.31■□□□□ 0.04
SDCBP-202ENST00000413219 MTCH2Q9Y6C9 303 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 REV3LO60673 3130 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 A0A087WZY1 265 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 PHF1O43189 567 aaPredicted RBP15.31■□□□□ 0.04
SDCBP-202ENST00000413219 ANGPTL7O43827 346 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 DKK1O94907 266 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 VAMP5O95183 116 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 CHAF1BQ13112 559 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 SPSB3Q6PJ21 355 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms