RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 C19orf25Q9UFG5 118 aaPredicted RBP12.36□□□□□ -0.43
ATRIP-204ENST00000412052 TNRC18O15417 2968 aaPredicted RBP12.36□□□□□ -0.43
ATRIP-204ENST00000412052 K7ESF4 209 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 TOX3O15405 576 aaPredicted RBP12.35□□□□□ -0.43
ATRIP-204ENST00000412052 ZNF728P0DKX0 622 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 CRYGSP22914 178 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 HABP2Q14520 560 aaPredicted RBP12.35□□□□□ -0.43
ATRIP-204ENST00000412052 TMEM187Q14656 261 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 SMCO1Q147U7 214 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 SLC23A3Q6PIS1 610 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 METTL9Q9H1A3 318 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 CACFD1Q9UGQ2 172 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 IGHV1-45A0A0A0MS14 117 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 IFNA21P01568 189 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 SNRNP70P08621 437 aaKnown RBP12.35□□□□□ -0.43
ATRIP-204ENST00000412052 ZNF32P17041 273 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 CHATP28329 748 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 HOXA1P49639 335 aaPredicted RBP12.35□□□□□ -0.43
ATRIP-204ENST00000412052 FAM189A2Q15884 450 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 MEX3BQ6ZN04 569 aaKnown RBP12.35□□□□□ -0.43
ATRIP-204ENST00000412052 MR1Q95460 341 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 SPTSSAQ969W0 71 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 UBE2ZQ9H832 354 aaPredicted RBP12.35□□□□□ -0.43
ATRIP-204ENST00000412052 RPS10P5Q9NQ39 176 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 SLC2A9Q9NRM0 540 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 P4HTMQ9NXG6 502 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 HS3ST3B1Q9Y662 390 aa12.35□□□□□ -0.43
ATRIP-204ENST00000412052 A0A1W2PPE3 182 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 NUDT19A8MXV4 375 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 ZNF587BE7ETH6 402 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 TAAR5O14804 337 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 SYNGR3O43761 229 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 COX6A1P12074 109 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 SNRPEP62304 92 aaKnown RBP12.34□□□□□ -0.43
ATRIP-204ENST00000412052 SWI5Q1ZZU3 235 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 ABCA11PQ4W5N1 156 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 FOXL2NBQ6ZUU3 175 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 SPEM1Q8N4L4 309 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 SUMF1Q8NBK3 374 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 NAA60Q9H7X0 242 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 PARP11Q9NR21 331 aa12.34□□□□□ -0.43
ATRIP-204ENST00000412052 RRP8O43159 456 aaKnown RBP12.34□□□□□ -0.43
ATRIP-204ENST00000412052 RBMS3Q6XE24 437 aaKnown RBP12.34□□□□□ -0.43
ATRIP-204ENST00000412052 CCDC163A0A0D9SF12 145 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 JTBO76095 146 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 NXPH3O95157 252 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 RFPL3SP0C7P2 107 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 HTR5AP47898 357 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 ZNF133P52736 654 aaPredicted RBP12.33□□□□□ -0.44
ATRIP-204ENST00000412052 RPS18P62269 152 aaKnown RBP12.33□□□□□ -0.44
ATRIP-204ENST00000412052 ZNF92Q03936 586 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 DAZAP2Q15038 168 aaPredicted RBP12.33□□□□□ -0.44
ATRIP-204ENST00000412052 IGSF11Q5DX21 431 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 SFT2D1Q8WV19 159 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 BORCS8Q96FH0 119 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 IMMP1LQ96LU5 166 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 TP53RKQ96S44 253 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 BIN3Q9NQY0 253 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 CRIM1Q9NZV1 1036 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 MRPS17Q9Y2R5 130 aaKnown RBP12.33□□□□□ -0.44
ATRIP-204ENST00000412052 ZDBF2Q9HCK1 2354 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 A6NLC8 198 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 EIF3GO75821 320 aaKnown RBP eCLIP12.33□□□□□ -0.44
ATRIP-204ENST00000412052 KLF7O75840 302 aaPredicted RBP12.33□□□□□ -0.44
ATRIP-204ENST00000412052 TSPAN15O95858 294 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 GLAP06280 429 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 NPBWR2P48146 333 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 DVL1P1P54792 670 aaPredicted RBP12.33□□□□□ -0.44
ATRIP-204ENST00000412052 AWAT1Q58HT5 328 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 FAM27BQ5VT28 67 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 EIF5AL1Q6IS14 154 aaKnown RBP12.33□□□□□ -0.44
ATRIP-204ENST00000412052 CALHM1Q8IU99 346 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 SAP25Q8TEE9 199 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 USB1Q9BQ65 265 aaKnown RBP12.33□□□□□ -0.44
ATRIP-204ENST00000412052 SCRT1Q9BWW7 348 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 DECR2Q9NUI1 292 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 NECAP2Q9NVZ3 263 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 ST3GAL6Q9Y274 331 aa12.33□□□□□ -0.44
ATRIP-204ENST00000412052 PHF1O43189 567 aaPredicted RBP12.32□□□□□ -0.44
ATRIP-204ENST00000412052 PPP1CCP36873 323 aaKnown RBP12.32□□□□□ -0.44
ATRIP-204ENST00000412052 DSCR4P56555 118 aaPredicted RBP12.32□□□□□ -0.44
ATRIP-204ENST00000412052 OR1F12Q8NHA8 337 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 ABHD14AQ9BUJ0 271 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 ANGPTL4Q9BY76 406 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 SPACA1Q9HBV2 294 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 FBXO7Q9Y3I1 522 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 CXCL13O43927 109 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 NRASP01111 189 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 AADACP22760 399 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 RGS19P49795 217 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 SSR4P51571 173 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 SUCLG1P53597 346 aaKnown RBP12.32□□□□□ -0.44
ATRIP-204ENST00000412052 EIF5AP63241 154 aaKnown RBP12.32□□□□□ -0.44
ATRIP-204ENST00000412052 MRPS34P82930 218 aaKnown RBP12.32□□□□□ -0.44
ATRIP-204ENST00000412052 PSG4Q00888 419 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 HLA-BQ31612 363 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 C9orf135Q5VTT2 229 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 NSUN5P2Q63ZY6 315 aa12.32□□□□□ -0.44
ATRIP-204ENST00000412052 OPN5Q6U736 354 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms