RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 RP9Q8TA86 221 aaKnown RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 TRMT10AQ8TBZ6 339 aaKnown RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FANK1Q8TC84 345 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 GATAD1Q8WUU5 269 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 C4orf3Q8WVX3 66 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 RNF133Q8WVZ7 376 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 LINC00476Q8WZB0 136 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ST6GALNAC6Q969X2 333 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 RPEQ96AT9 228 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 HSH2DQ96JZ2 352 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 HRASLS5Q96KN8 279 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 SNX22Q96L94 193 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF488Q96MN9 340 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR8B4Q96RC9 309 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ABHD6Q9BV23 337 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FGF23Q9GZV9 251 aaPredicted RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 GHITMQ9H3K2 345 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 GAL3ST2Q9H3Q3 398 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 NIPAL2Q9H841 368 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ISYNA1Q9NPH2 558 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 PCDHB16Q9NRJ7 776 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 DCAF13Q9NV06 445 aaKnown RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 C19orf73Q9NVV2 129 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 DNAJC27Q9NZQ0 273 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF319Q9P2F9 582 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 UBE2J1Q9Y385 318 aaPredicted RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 LINC00312Q9Y6C7 94 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ENPP4Q9Y6X5 453 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 MUC4Q99102 2169 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 KIAA2026Q5HYC2 2103 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 A0A087X0M5 115 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TRGV10A0A0A0MS01 117 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TRBV4-1A0A0J9YWV2 114 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 A0A1B0GX30 115 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMEM82A0PJX8 343 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 FUOMA2VDF0 154 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 LINC01548A6NM66 108 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 BBIP1A8MTZ0 92 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 PRR23D1E9PI22 279 aaPredicted RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 LY6LH3BQJ8 138 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 H3BSH0 61 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 I3L521 148 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 FXYD1O00168 92 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 CXCR6O00574 342 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 OVOL1O14753 267 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 MRASO14807 208 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 MGST3O14880 152 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 GSTA4O15217 222 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 HSPA12AO43301 675 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 MPZL2O60487 215 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 PSPNO60542 156 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 MMP23AO75900 390 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 GADD45GO95257 159 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 NRASP01111 189 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 IGHG4P01861 327 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 LYNP07948 512 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 PRR23D2P0DMB1 279 aaPredicted RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR5H8P0DN80 308 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 PSKH1P11801 424 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 SNRPBP14678 240 aaKnown RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ARSBP15848 533 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 H2AFXP16104 143 aaPredicted RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 SPI1P17947 270 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 VDAC1P21796 283 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 GABRR1P24046 479 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 CDK2P24941 298 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 MPZP25189 248 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 CNTFRP26992 372 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 PEX2P28328 305 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 CD34P28906 385 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ERP29P30040 261 aaKnown RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 OPRL1P41146 370 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 KIR3DL2P43630 455 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 GPR12P47775 334 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 P2RX3P56373 397 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 PSMA6P60900 246 aaKnown RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 MAGOHP61326 146 aaKnown RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ISL1P61371 349 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ERVK11-1P61568 191 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 RIPPLY1Q0D2K3 151 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TSPAN31Q12999 210 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 IL24Q13007 206 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 RBM39Q14498 530 aaKnown RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 KPNB1Q14974 876 aaKnown RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 GRK1Q15835 563 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 HAGHQ16775 308 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 COQ5Q5HYK3 327 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF684Q5T5D7 378 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 PRAMEF5Q5TYX0 476 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 METTL21CQ5VZV1 264 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 PLCXD3Q63HM9 321 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ACSM6Q6P461 480 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMEM65Q6PI78 240 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 HEPN1Q6WQI6 88 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ASRGL1Q7L266 308 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TCF23Q7RTU1 214 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ARPINQ7Z6K5 226 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 COMMD2Q86X83 199 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TGIF2LXQ8IUE1 241 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms