RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SMIM6P0DI80 62 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 RAB6AP20340 208 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 GATA3P23771 443 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 PAX9P55771 341 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 KRTAP10-9P60411 292 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 MMDQ15546 238 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 OR1Q1Q15612 314 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SCGB2B2Q4G0G5 96 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 C4orf46Q504U0 113 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 NXPE4Q6UWF7 544 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 THNSL2Q86YJ6 484 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 WFDC8Q8IUA0 241 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 OR2T33Q8NG76 320 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 BRIX1Q8TDN6 353 aaKnown RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 TMEM239Q8WW34 195 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 MOAP1Q96BY2 351 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 MED29Q9NX70 200 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 HS3ST2Q9Y278 367 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ZNF835Q9Y2P0 537 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 IGKV1-12A0A0C4DH73 117 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 TEX13DA0A0J9YY54 714 aaPredicted RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 C13orf42A0A1B0GVH6 325 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 A6NCN8 305 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ZNF879B4DU55 563 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SEC14L6B5MCN3 397 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 PRAMEF2O60811 474 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SRSF10O75494 262 aaKnown RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 IGKV1D-12P01611 117 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ERGP11308 486 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 FUT3P21217 361 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 TDGF1P3P51864 188 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 BRWD1-AS2P59051 145 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SRSF4Q08170 494 aaKnown RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 GCSAMLQ5JQS6 135 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ZNF585AQ6P3V2 769 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 C20orf204Q6ZNR8 217 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SSX9Q7RTT3 188 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 TRAPPC5Q8IUR0 188 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 PIGXQ8TBF5 258 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ASB17Q8WXJ9 295 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 HOXB13Q92826 284 aaPredicted RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 CHMP1AQ9HD42 196 aaPredicted RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 RPRMQ9NS64 109 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SERTAD3Q9UJW9 196 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 LIPGQ9Y5X9 500 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 V9GY05 133 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 IGKV1-27A0A075B6S5 117 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 A0A1W2PQM1 296 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 TRAPPC13A5PLN9 417 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 FIGNL2A6NMB9 653 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 C9J4A7 227 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 K7EM74 188 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 CST7O76096 145 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 TFF1P04155 84 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 AMY2AP04746 511 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ELFN1P0C7U0 828 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SAGP10523 405 aaPredicted RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 GTF2F2P13984 249 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 CEACAM6P40199 344 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 CDX1P47902 265 aaPredicted RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 POMZP3Q6PJE2 187 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 C6orf15Q6UXA7 325 aaPredicted RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 BAIAP2L2Q6UXY1 529 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 HIST2H3AQ71DI3 136 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 BEST3Q8N1M1 668 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SLC38A9Q8NBW4 561 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 OR2A5Q96R48 311 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 LPAR5Q9H1C0 372 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 C11orf1Q9H5F2 150 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SIRT7Q9NRC8 400 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 DMRT1Q9Y5R6 373 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 WSB1Q9Y6I7 421 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 PHF1O43189 567 aaPredicted RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ANGPTL7O43827 346 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ZIC3O60481 467 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 HMGN1P05114 100 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 PFN1P07737 140 aaKnown RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ZNF25P17030 456 aaPredicted RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 AKR1C4P17516 323 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 FSTP19883 344 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 RAB28P51157 221 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 NDUFA6P56556 154 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SLC26A5P58743 744 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 MPPED2Q15777 294 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 EXT1Q16394 746 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 TMEM244Q5VVB8 128 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 FBXW9Q5XUX1 488 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 Q6ZWC4 215 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 RRM2BQ7LG56 351 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 RPP25LQ8N5L8 163 aaKnown RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 CAMKVQ8NCB2 501 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 CPEB3Q8NE35 698 aaKnown RBP2.66□□□□□ -1.98
RGPD3-202ENST00000409886 STEAP2Q8NFT2 490 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 SGCZQ96LD1 299 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 RCHY1Q96PM5 261 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 RSG1Q9BU20 258 aa2.66□□□□□ -1.98
RGPD3-202ENST00000409886 ALG12Q9BV10 488 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms