RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CIB2O75838 187 aa11.97□□□□□ -0.49
CBX3-203ENST00000409747 CYB5AP00167 134 aa11.97□□□□□ -0.49
CBX3-203ENST00000409747 ZNF728P0DKX0 622 aa11.97□□□□□ -0.49
CBX3-203ENST00000409747 EFNB2P52799 333 aa11.97□□□□□ -0.49
CBX3-203ENST00000409747 EDDM3BP56851 147 aa11.97□□□□□ -0.49
CBX3-203ENST00000409747 UBE2V2Q15819 145 aa11.97□□□□□ -0.49
CBX3-203ENST00000409747 ZNF782Q6ZMW2 699 aaPredicted RBP11.97□□□□□ -0.49
CBX3-203ENST00000409747 ENTHD1Q8IYW4 607 aa11.97□□□□□ -0.49
CBX3-203ENST00000409747 OR8H2Q8N162 312 aa11.97□□□□□ -0.49
CBX3-203ENST00000409747 PPP1R35Q8TAP8 253 aa11.97□□□□□ -0.49
CBX3-203ENST00000409747 CDCA4Q9BXL8 241 aa11.97□□□□□ -0.49
CBX3-203ENST00000409747 NOTCH1P46531 2555 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 LOC107986453A0A1B0GWG9 222 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 VGLL3A8MV65 326 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 ZNF737O75373 536 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 APOL3O95236 402 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 ACTC1P68032 377 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 ACTA1P68133 377 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 MEF2CQ06413 473 aaPredicted RBP11.96□□□□□ -0.49
CBX3-203ENST00000409747 CRIP3Q6Q6R5 217 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 DNAAF1Q8NEP3 725 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 TRUB1Q8WWH5 349 aaKnown RBP11.96□□□□□ -0.49
CBX3-203ENST00000409747 SLAMF9Q96A28 289 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 SEBOXQ9HB31 216 aaPredicted RBP11.96□□□□□ -0.49
CBX3-203ENST00000409747 ABCB10Q9NRK6 738 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 IMPAD1Q9NX62 359 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 MTCH1Q9NZJ7 389 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 GNG8Q9UK08 70 aa11.96□□□□□ -0.49
CBX3-203ENST00000409747 FAM90A8PA6NJQ4 464 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 H3BSH0 61 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 ARG1P05089 322 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 RBP2P50120 134 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 DLX6P56179 175 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 TMEM244Q5VVB8 128 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 SLC25A26Q70HW3 274 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 EGFL6Q8IUX8 553 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 PRSS35Q8N3Z0 413 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 FAM110DQ8TAY7 271 aaPredicted RBP11.95□□□□□ -0.5
CBX3-203ENST00000409747 EMG1Q92979 244 aaKnown RBP11.95□□□□□ -0.5
CBX3-203ENST00000409747 EME1Q96AY2 570 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 MALSU1Q96EH3 234 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 SNX22Q96L94 193 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 ZNF714Q96N38 554 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 PITPNC1Q9UKF7 332 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 ORC6Q9Y5N6 252 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 TGP01266 2768 aa11.95□□□□□ -0.5
CBX3-203ENST00000409747 IGKV1-27A0A075B6S5 117 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 hADV38S2A0JD32 116 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 ODF3BA8MYP8 253 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 IGHV1-8P0DP01 117 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 PEX2P28328 305 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 POLR2IP36954 125 aaKnown RBP11.94□□□□□ -0.5
CBX3-203ENST00000409747 ATP1B3P54709 279 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 ISL1P61371 349 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 ZNF626Q68DY1 528 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 KCTD20Q7Z5Y7 419 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 KLHDC1Q8N7A1 406 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 OR11H6Q8NGC7 330 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 RPS4Y2Q8TD47 263 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 GLS2Q9UI32 602 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 SIGLEC9Q9Y336 463 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 HAND1O96004 215 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 PRKACBP22694 351 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 PAX6P26367 422 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 EDDM3AQ14507 147 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 TP53I3Q53FA7 332 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 SPIN3Q5JUX0 258 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 UTS2BQ765I0 119 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 LHFPL4Q7Z7J7 247 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 MYCBPQ99417 103 aaPredicted RBP11.94□□□□□ -0.5
CBX3-203ENST00000409747 NKX3-1Q99801 234 aaPredicted RBP11.94□□□□□ -0.5
CBX3-203ENST00000409747 TCF19Q9Y242 345 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 LINC00312Q9Y6C7 94 aa11.94□□□□□ -0.5
CBX3-203ENST00000409747 TRBV2A0A0J9YWF9 115 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 SAC3D1A6NKF1 404 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 SNTNA6NMZ2 147 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 F8VVB4 439 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 F8VWA3 439 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 CHST1O43916 411 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 OCM2P0CE71 109 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 OCMP0CE72 109 aaPredicted RBP11.93□□□□□ -0.5
CBX3-203ENST00000409747 ZNF20P17024 532 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 GABRR1P24046 479 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 KIR3DL2P43630 455 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 ZNF85Q03923 595 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 DYNC1I2Q13409 638 aaKnown RBP11.93□□□□□ -0.5
CBX3-203ENST00000409747 GRK1Q15835 563 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 FAM189A2Q15884 450 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 MEDAGQ5VYS4 303 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 ZBTB49Q6ZSB9 765 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 LHFPL2Q6ZUX7 228 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 PIFOQ8TCI5 191 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 CFHR4Q92496 578 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 SPSB1Q96BD6 273 aa11.93□□□□□ -0.5
CBX3-203ENST00000409747 H3BUI4 141 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 INMTO95050 263 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 ISG15P05161 165 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 AZGP1P25311 298 aaKnown RBP11.92□□□□□ -0.5
CBX3-203ENST00000409747 POU3F4P49335 361 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 DYNLT3P51808 116 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms