RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 TAGLN2P37802 199 aaKnown RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 GLIPR1P48060 266 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CAMLGP49069 296 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 UBE2KP61086 200 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TRA2BP62995 288 aaKnown RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLC35A1P78382 337 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SPOCK1Q08629 439 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 PNRC1Q12796 327 aaPredicted RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 TGIF1Q15583 401 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TMEM241Q24JQ0 296 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 AMZ1Q400G9 498 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 MIDNQ504T8 468 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TP53I3Q53FA7 332 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 HIKESHIQ53FT3 197 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 COA6Q5JTJ3 125 aaKnown RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 C1orf189Q5VU69 101 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TMEM268Q5VZI3 342 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 FBXW9Q5XUX1 488 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 AGTRAPQ6RW13 159 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 FRRS1Q6ZNA5 592 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 Q6ZS52 159 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLC25A26Q70HW3 274 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 BIVMQ86UB2 503 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 RNF175Q8N4F7 328 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CLDN19Q8N6F1 224 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TMEM217Q8N7C4 229 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLC35G3Q8N808 338 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 ZSCAN4Q8NAM6 433 aaPredicted RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 OR13C2Q8NGS9 318 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 OR8S1Q8NH09 359 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 OR8U1Q8NH10 309 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 MFSD8Q8NHS3 518 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 RAB8BQ92930 207 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 KXD1Q9BQD3 176 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 ATG101Q9BSB4 218 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 PCGF1Q9BSM1 259 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 GPR174Q9BXC1 333 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 ATG10Q9H0Y0 220 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CXCL16Q9H2A7 254 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 OR2S2Q9NQN1 319 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 GLRX2Q9NS18 164 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLC23A2Q9UGH3 650 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 IL20RAQ9UHF4 553 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 MRPS33Q9Y291 106 aaKnown RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 ZFP30Q9Y2G7 519 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CKAP5Q14008 2032 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 NBEAL1Q6ZS30 2694 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 NOTCH4Q99466 2003 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 TRBV5-5A0A0J9YX44 114 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 C13orf42A0A1B0GVH6 325 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 A0A1W2PPK0 400 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 TSPAN11A1L157 253 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 C20orf202A1L168 122 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 CPSF4LA6NMK7 179 aaKnown RBP4.76□□□□□ -1.65
CLK1-202ENST00000409403 ZNF705GA8MUZ8 300 aaPredicted RBP4.76□□□□□ -1.65
CLK1-202ENST00000409403 C9JQL5 133 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 CYB5BO43169 146 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 TNFSF14O43557 240 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 DIRAS3O95661 229 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 OPN1MWP04001 364 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 KLK1P06870 262 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 DANCRP0C864 163 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 TRGC1P0CF51 173 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 OPN1MW2P0DN77 364 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 OPN1MW3P0DN78 364 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 OR10J1P30954 320 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 RGRP47804 291 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 OR1G1P47890 313 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 TNFSF10P50591 281 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 KLF3P57682 345 aaPredicted RBP4.76□□□□□ -1.65
CLK1-202ENST00000409403 RHOAP61586 193 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 RBX1P62877 108 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 MC1RQ01726 317 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 HSPB3Q12988 150 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 PPP1R1AQ13522 171 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 CRMP1Q14194 572 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 HERPUD1Q15011 391 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 ELOBQ15370 118 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 ODF4Q2M2E3 257 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 PIP5KL1Q5T9C9 394 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 ZNF774Q6NX45 483 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 RPUSD3Q6P087 351 aaKnown RBP4.76□□□□□ -1.65
CLK1-202ENST00000409403 FBXO42Q6P3S6 717 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 GDPD4Q6W3E5 623 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 ADIPOR2Q86V24 386 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 GCNT2Q8N0V5 402 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 NKAIN3Q8N8D7 197 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 OR1P1Q8NH06 330 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 Q8WTZ3 238 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 TVP23CQ96ET8 276 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 FAM210BQ96KR6 192 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 C2orf50Q96LR7 162 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 GAL3ST4Q96RP7 486 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 GFI1Q99684 422 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 MCHR1Q99705 422 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 NIPSNAP3BQ9BS92 247 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 C20orf24Q9BUV8 137 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 RNF126Q9BV68 326 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 TCEAL2Q9H3H9 227 aaPredicted RBP4.76□□□□□ -1.65
CLK1-202ENST00000409403 IL26Q9NPH9 171 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms