RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 HS3ST3A1Q9Y663 406 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 WSB1Q9Y6I7 421 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 LY6G6EA0A0G2JKS1 128 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 TMEM14DPA8MWL7 114 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 HCRTR2O43614 444 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 CBR3O75828 277 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 CELA2BP08218 269 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 C8orf89P0DMQ9 161 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 PPP1CCP36873 323 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 GPR3P46089 330 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 KLF3P57682 345 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 TAS2R46P59540 309 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 GPR18Q14330 331 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 ZNF266Q14584 549 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 ICAM4Q14773 271 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 SLC9A3R2Q15599 337 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 KCNMB1Q16558 191 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 ODF4Q2M2E3 257 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 TMEM52BQ4KMG9 183 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 COL5A1-AS1Q5SY13 56 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 KCTD18Q6PI47 426 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 ZNF547Q8IVP9 402 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 TMEM156Q8N614 296 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 CSNK1A1LQ8N752 337 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 GVQW1Q8N7I0 195 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 OR5AR1Q8NGP9 310 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 OR13C9Q8NGT0 318 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 ZPLD1Q8TCW7 415 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 P2RX4Q99571 388 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 PCGF1Q9BSM1 259 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 TBL1XR1Q9BZK7 514 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 OR51B6Q9H340 312 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 ELOVL3Q9HB03 270 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 GPR173Q9NS66 373 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 DNAJB12Q9NXW2 375 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 TAS2R4Q9NYW5 299 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 IL17BQ9UHF5 180 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 MSRB2Q9Y3D2 182 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 OR1A2Q9Y585 309 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 U3KQA8 63 aa9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 ARHGEF17Q96PE2 2063 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-204ENST00000409357 A0A1B0GTH9 108 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 FAM230AA0A1W2PPH8 454 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 CDC14CA4D256 554 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 ZNF705GA8MUZ8 300 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 K7ESM1 405 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 TNFSF13O75888 250 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 NKX2-2O95096 273 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 RENP00797 406 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 PPBPP02775 128 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 PTNP21246 168 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 GALNSP34059 522 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 RBMXP38159 391 aaKnown RBP9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 POLR2HP52434 150 aaKnown RBP9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 FAM3BP58499 235 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 RPS20P60866 119 aaKnown RBP9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 SELENOTP62341 195 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 ZNF141Q15928 474 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 PCK2Q16822 640 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 AADACL3Q5VUY0 350 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 TEX38Q6PEX7 206 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 ZNF440Q8IYI8 595 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 SEMA6DQ8NFY4 1073 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 OR2D3Q8NGH3 330 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 ORAOV1Q8WV07 137 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 ERGIC1Q969X5 290 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 RASD2Q96D21 266 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 SLC25A44Q96H78 314 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 BTF3L4Q96K17 158 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 SNX22Q96L94 193 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 RARRES2Q99969 163 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 ZNF2Q9BSG1 426 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 WFDC1Q9HC57 220 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 GPR84Q9NQS5 396 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 AURKAIP1Q9NWT8 199 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 SLC5A6Q9Y289 635 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 ATMQ13315 3056 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 KIF26BQ2KJY2 2108 aa9.33□□□□□ -0.92
NIF3L1-204ENST00000409357 ZNF860A6NHJ4 632 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 ZNF732B4DXR9 585 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 C4orf51C9J302 202 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 H0YL77 283 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 RRP8O43159 456 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 SRSF10O75494 262 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 TYMSP04818 313 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 PCCBP05166 539 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 PFN1P07737 140 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 SLC35G4P0C7Q5 338 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 BCL6P41182 706 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 MTCP1P56278 107 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 EIF3IQ13347 325 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 ARL6IP1Q15041 203 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 SLC18B1Q6NT16 456 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 DEGS2Q6QHC5 323 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 NUFIP2Q7Z417 695 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 SLC22A24Q8N4F4 322 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 OR2A1Q8NGT9 310 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 OR5H2Q8NGV7 314 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 OR6N2Q8NGY6 317 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms