RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 DEFB118Q96PH6 123 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 NEU1Q99519 415 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 VAX2Q9UIW0 290 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 ADAMTSL1Q8N6G6 1762 aa8.6□□□□□ -1.03
SMAD9-203ENST00000399275 UBE2L5PA0A1B0GUS4 154 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 A0A1W2PQU0 124 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 CRXO43186 299 aaPredicted RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 KLF7O75840 302 aaPredicted RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 MELKQ14680 651 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 EMC4Q5J8M3 183 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 OR1N2Q8NGR9 330 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 TMPRSS13Q9BYE2 586 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 ZNF107Q9UII5 783 aaPredicted RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 A0A1W2PP55 124 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 F13BP05160 661 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 PGFP49763 221 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 CST6Q15828 149 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 LDLRAD1Q5T700 205 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 MRPL54Q6P161 138 aaKnown RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 NUFIP2Q7Z417 695 aaKnown RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 WDFY1Q8IWB7 410 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 SLC16A11Q8NCK7 471 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 ZNF418Q8TF45 676 aaPredicted RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 PPP1R3EQ9H7J1 279 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 ITGB1BP1O14713 200 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 C16orf82Q7Z2V1 217 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 UBALD1Q8TB05 177 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 SLC35A4Q96G79 324 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 SHDQ96IW2 340 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 GUCD1Q96NT3 240 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 ABHD1Q96SE0 405 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 DHCR7Q9UBM7 475 aaKnown RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 A0A1W2PRS3 328 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 H3BP45 60 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 SEMG1P04279 462 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 SNRPCP09234 159 aaKnown RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 SLC35E2P0CK97 266 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 HOXA5P20719 270 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 GPX4P36969 197 aaPredicted RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 NOGQ13253 232 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 FAM27D1Q5T7N8 215 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 ADAMTSL4Q6UY14 1074 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 MOB3CQ70IA8 216 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 BHLHA9Q7RTU4 235 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 OR5A1Q8NGJ0 315 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 OR5C1Q8NGR4 320 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 OR52E5Q8NH55 327 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 ARRDC3Q96B67 414 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 OR1F2PQ96R84 312 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 INSM2Q96T92 566 aaPredicted RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 TMEM140Q9NV12 185 aa8.59□□□□□ -1.03
SMAD9-203ENST00000399275 DNMT3BQ9UBC3 853 aaKnown RBP8.59□□□□□ -1.03
SMAD9-203ENST00000399275 A0A0J9YY10 115 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 M0R296 226 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 ALOX12BO75342 701 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 HPXP02790 462 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 CYBAP13498 195 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 ST6GAL1P15907 406 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 ZFP36L2P47974 494 aaKnown RBP8.58□□□□□ -1.04
SMAD9-203ENST00000399275 FGF8P55075 233 aaPredicted RBP8.58□□□□□ -1.04
SMAD9-203ENST00000399275 OR5R1Q8NH85 324 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 DERL3Q96Q80 235 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 MANBALQ9NQG1 85 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 TMEM38BQ9NVV0 291 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 SLC45A2Q9UMX9 530 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 MICAL3Q7RTP6 2002 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 COL5A3P25940 1745 aaPredicted RBP8.58□□□□□ -1.04
SMAD9-203ENST00000399275 TRAV8-2A0A0B4J237 113 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 CLEC18AA5D8T8 446 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 C1QTNF9BB2RNN3 333 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 FOLR2P14207 255 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 OR1D5P58170 312 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 RAC1P63000 192 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 ACSM6Q6P461 480 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 D2HGDHQ8N465 521 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 CLEC18CQ8NCF0 446 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 SDF2Q99470 211 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 MRPS18AQ9NVS2 196 aaKnown RBP8.58□□□□□ -1.04
SMAD9-203ENST00000399275 TMEM202A6NGA9 273 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 TGM5O43548 720 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 FGF2P09038 288 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 RNFT1Q5M7Z0 435 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 LAIR1Q6GTX8 287 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 CISD2Q8N5K1 135 aaKnown RBP8.58□□□□□ -1.04
SMAD9-203ENST00000399275 FAM181AQ8N9Y4 354 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 MISP3Q96FF7 219 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 SPSB2Q99619 263 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 RBM24Q9BX46 236 aaKnown RBP8.58□□□□□ -1.04
SMAD9-203ENST00000399275 HCFC1R1Q9NWW0 138 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 MTFP1Q9UDX5 166 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 C19orf25Q9UFG5 118 aaPredicted RBP8.58□□□□□ -1.04
SMAD9-203ENST00000399275 LSM2Q9Y333 95 aaKnown RBP8.58□□□□□ -1.04
SMAD9-203ENST00000399275 HLA-DQB1P01920 261 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 PLGLB1Q02325 96 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 WDR25Q64LD2 544 aaPredicted RBP8.58□□□□□ -1.04
SMAD9-203ENST00000399275 FAM57BQ71RH2 274 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 LILRA3Q8N6C8 439 aaPredicted RBP8.58□□□□□ -1.04
SMAD9-203ENST00000399275 CXorf51AA0A1B0GTR3 108 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 SIRPB1O00241 398 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms