RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 HIST1H2BDP58876 126 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 TAS2R46P59540 309 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HIST1H2BCP62807 126 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 IL15RAQ13261 267 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 SSX2Q16385 188 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HIST2H2BEQ16778 126 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 Q3ZCU0 254 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF574Q6ZN55 896 aaPredicted RBP8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 C9orf40Q8IXQ3 194 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 SLC22A18ASQ8N1D0 253 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 RTN4IP1Q8WWV3 396 aaPredicted RBP8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HIST1H2BHQ93079 126 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 PGAM5Q96HS1 289 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 SNX22Q96L94 193 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HIST1H2BNQ99877 126 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HIST1H2BMQ99879 126 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 IGHV5-51A0A0C4DH38 117 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 SCAF4O95104 1147 aaKnown RBP8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 LYL1P12980 280 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 FCARP24071 287 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 G0S2P27469 103 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 CASP6P55212 293 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 LANCL3Q6ZV70 420 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 H1FNTQ75WM6 255 aaPredicted RBP8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 GRINAQ7Z429 371 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 C5orf24Q7Z6I8 188 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF429Q86V71 674 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 LRRC18Q8N456 261 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 ASB10Q8WXI3 467 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 C1orf147Q96MC9 270 aaPredicted RBP8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 CCNL2Q96S94 520 aaPredicted RBP8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 PECRQ9BY49 303 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 LIME1Q9H400 295 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 PRDM13Q9H4Q3 707 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 LMAN1LQ9HAT1 526 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 POMT1Q9Y6A1 747 aa8.65□□□□□ -1.03
PTCHD4-202ENST00000398738 FAM186AA6NE01 2351 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 E5RGE8 158 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF587BE7ETH6 402 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 GEMIN2O14893 280 aaKnown RBP8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 PHF1O43189 567 aaPredicted RBP8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 SPRY1O43609 319 aaPredicted RBP8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 SCGNO76038 276 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 SNRPCP09234 159 aaKnown RBP8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 RND3P61587 244 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 NKAIN1Q4KMZ8 207 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 LHFPL1Q86WI0 220 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 ZDHHC12Q96GR4 267 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 MRGPRX1Q96LB2 322 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 ATG101Q9BSB4 218 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 SCRT1Q9BWW7 348 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 AK3Q9UIJ7 227 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 HSF4Q9ULV5 492 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 NSG2Q9Y328 171 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 DOCK8Q8NF50 2099 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 A0A087WZY1 265 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 FAM230AA0A1W2PPH8 454 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 RBFOX3A6NFN3 312 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 PAX6P26367 422 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 AKT2P31751 481 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 UBE2V2Q15819 145 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 LRP11Q86VZ4 500 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 MUCL1Q96DR8 90 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 MISP3Q96FF7 219 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 THOC3Q96J01 351 aaKnown RBP8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 WWTR1Q9GZV5 400 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 TUBA4BQ9H853 241 aa8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 TNRC18O15417 2968 aaPredicted RBP8.64□□□□□ -1.03
PTCHD4-202ENST00000398738 NSG1A0A0A6YYJ2 146 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 H3BP45 60 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 GAPDHP04406 335 aaKnown RBP8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 MMP9P14780 707 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 DDTP30046 118 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 RBP2P50120 134 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF880Q6PDB4 577 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 NECAP1Q8NC96 275 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ADIPOR1Q96A54 375 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 LURAP1Q96LR2 239 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 COPS7AQ9UBW8 275 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 LHFPL6Q9Y693 200 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 FRG2CA6NGY1 282 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 A6NIZ1 184 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 SEC11BP0C7V7 166 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 TRGC1P0CF51 173 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 PGA4P0DJD7 388 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 PGA5P0DJD9 388 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF728P0DKX0 622 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF17P17021 662 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ATP6V0CP27449 155 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ARL4DP49703 201 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 DAP3P51398 398 aaKnown RBP8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 RAP1BP61224 184 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 RAB11AP62491 216 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 GABREP78334 506 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ELOBQ15370 118 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF124Q15973 351 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 TMEM176BQ3YBM2 270 aaPredicted RBP8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 SPIN3Q5JUX0 258 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 SLC25A24Q6NUK1 477 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms