RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 HIST1H2BBP33778 126 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 APOBEC1P41238 236 aaKnown RBP8.62□□□□□ -1.03
TRIM39-203ENST00000396547 TNFRSF4P43489 277 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 ARL4DP49703 201 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 DAP3P51398 398 aaKnown RBP8.62□□□□□ -1.03
TRIM39-203ENST00000396547 HIST1H2BDP58876 126 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 HIST1H2BCP62807 126 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 RUNX1Q01196 453 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 SSX2Q16385 188 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 HIST2H2BEQ16778 126 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.62□□□□□ -1.03
TRIM39-203ENST00000396547 LANCL3Q6ZV70 420 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 LRRC18Q8N456 261 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 HIST1H2BHQ93079 126 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 ADIPOR1Q96A54 375 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 SCRT1Q9BWW7 348 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 UNKLQ9H9P5 680 aaKnown RBP8.62□□□□□ -1.03
TRIM39-203ENST00000396547 PLEKHA2Q9HB19 425 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 COPS7AQ9UBW8 275 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 SDK2Q58EX2 2172 aa8.62□□□□□ -1.03
TRIM39-203ENST00000396547 FAM230AA0A1W2PPH8 454 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 ZNF587BE7ETH6 402 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 SPRY1O43609 319 aaPredicted RBP8.61□□□□□ -1.03
TRIM39-203ENST00000396547 DDAH2O95865 285 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 THEGLP0DJG4 465 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 SFTPCP11686 197 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 DRD1P21728 446 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 RND3P61587 244 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 GABREP78334 506 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 IGLV3-21P80748 117 aaPredicted RBP8.61□□□□□ -1.03
TRIM39-203ENST00000396547 MUCL1Q96DR8 90 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 ZDHHC12Q96GR4 267 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 KCNK17Q96T54 332 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 LIME1Q9H400 295 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 AK3Q9UIJ7 227 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 LHFPL6Q9Y693 200 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 NSG1A0A0A6YYJ2 146 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 ALG1L2C9J202 215 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 SCAF4O95104 1147 aaKnown RBP8.61□□□□□ -1.03
TRIM39-203ENST00000396547 GUSBP08236 651 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 SEC11BP0C7V7 166 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 ZNF728P0DKX0 622 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 TUBG1P23258 451 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 NBL1P41271 181 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 P2RY1P47900 373 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 RBP2P50120 134 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 UBE2V2Q15819 145 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 C5orf24Q7Z6I8 188 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 TMEM105Q8N8V8 129 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 ZNF721Q8TF20 911 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 SNX22Q96L94 193 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 PRDM13Q9H4Q3 707 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 URB1O60287 2271 aaKnown RBP8.61□□□□□ -1.03
TRIM39-203ENST00000396547 GEMIN2O14893 280 aaKnown RBP8.61□□□□□ -1.03
TRIM39-203ENST00000396547 GPR137BO60478 399 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 NPIPB7O75200 414 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 RAB1AP62820 205 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 GNMTQ14749 295 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 PPA1Q15181 289 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 NKAIN1Q4KMZ8 207 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 SPIN3Q5JUX0 258 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 DEGS2Q6QHC5 323 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 WWTR1Q9GZV5 400 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 OPA3Q9H6K4 179 aa8.61□□□□□ -1.03
TRIM39-203ENST00000396547 A0A087WZY1 265 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 KIR2DS5A0A0G2JLQ3 304 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 A0A0G2JNG1 304 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 KIR2DS3K7RE56 304 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 ST8SIA3O43173 380 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 SNRPCP09234 159 aaKnown RBP8.6□□□□□ -1.03
TRIM39-203ENST00000396547 TRGC1P0CF51 173 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 ZNF17P17021 662 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 ATP6V0CP27449 155 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 G0S2P27469 103 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 DDTP30046 118 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 HSD11B2P80365 405 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 FOXF1Q12946 379 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 KIR2DS5Q14953 304 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 ELOBQ15370 118 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 TMEM176BQ3YBM2 270 aaPredicted RBP8.6□□□□□ -1.03
TRIM39-203ENST00000396547 SLC25A24Q6NUK1 477 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 ARHGEF39Q8N4T4 335 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 RLN3Q8WXF3 142 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 FRZBQ92765 325 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 HAS2Q92819 552 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 LURAP1Q96LR2 239 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 CHST11Q9NPF2 352 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 SERINC1Q9NRX5 453 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 GPR173Q9NS66 373 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 PPP4R1LQ9P1A2 415 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 HSF4Q9ULV5 492 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 TCRBV21S2A2A0A5A6 115 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 TSTD3H0UI37 97 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 PGA4P0DJD7 388 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 PGA5P0DJD9 388 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 MMP9P14780 707 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 CTHP32929 405 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 EFNA3P52797 238 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms