RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 BLMHQ13867 455 aa13.11□□□□□ -0.31
CXCL12-206ENST00000395795 AANATQ16613 207 aa13.11□□□□□ -0.31
CXCL12-206ENST00000395795 ZSCAN26Q16670 478 aa13.11□□□□□ -0.31
CXCL12-206ENST00000395795 DHRS7BQ6IAN0 325 aaPredicted RBP13.11□□□□□ -0.31
CXCL12-206ENST00000395795 LHFPL4Q7Z7J7 247 aa13.11□□□□□ -0.31
CXCL12-206ENST00000395795 OR52N4Q8NGI2 321 aa13.11□□□□□ -0.31
CXCL12-206ENST00000395795 SLAMF9Q96A28 289 aa13.11□□□□□ -0.31
CXCL12-206ENST00000395795 CEP19Q96LK0 163 aa13.11□□□□□ -0.31
CXCL12-206ENST00000395795 GNG8Q9UK08 70 aa13.11□□□□□ -0.31
CXCL12-206ENST00000395795 SIGLEC9Q9Y336 463 aa13.11□□□□□ -0.31
CXCL12-206ENST00000395795 IGKV1-12A0A0C4DH73 117 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 IGKV1D-12P01611 117 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 PIPP12273 146 aaPredicted RBP13.1□□□□□ -0.31
CXCL12-206ENST00000395795 FUT6P51993 359 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 CDC42P60953 191 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 ZNF782Q6ZMW2 699 aaPredicted RBP13.1□□□□□ -0.31
CXCL12-206ENST00000395795 SLC25A26Q70HW3 274 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 CCDC54Q8NEL0 328 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 OR51A4Q8NGJ6 313 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 C10orf35Q96D05 121 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 RNFT2Q96EX2 444 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 PELI1Q96FA3 418 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 PPA2Q9H2U2 334 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 FBLN5Q9UBX5 448 aa13.1□□□□□ -0.31
CXCL12-206ENST00000395795 EXOGQ9Y2C4 368 aaKnown RBP13.1□□□□□ -0.31
CXCL12-206ENST00000395795 OR4C45A6NMZ5 311 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 SLC16A6O15403 523 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 PSPNO60542 156 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 TSPAN15O95858 294 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 PAHP00439 452 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 IGHA1P01876 353 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 ISG15P05161 165 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 CHRM2P08172 466 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 COX7A1P24310 79 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 ALDH3A2P51648 485 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 EFNB2P52799 333 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 PRKDCP78527 4128 aaKnown RBP13.09□□□□□ -0.31
CXCL12-206ENST00000395795 ZNF91Q05481 1191 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 LRRC75BQ2VPJ9 315 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 ZIK1Q3SY52 487 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-206ENST00000395795 HIST2H2BDQ6DRA6 164 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 CCBE1Q6UXH8 406 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-206ENST00000395795 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 DNAAF1Q8NEP3 725 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 RFKQ969G6 155 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 LGALS12Q96DT0 336 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 SLC29A1Q99808 456 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 HEXA-AS1Q9H8Q6 139 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 RBFOX1Q9NWB1 397 aaKnown RBP13.09□□□□□ -0.31
CXCL12-206ENST00000395795 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.09□□□□□ -0.31
CXCL12-206ENST00000395795 SLC7A11Q9UPY5 501 aa13.09□□□□□ -0.31
CXCL12-206ENST00000395795 NOTCH1P46531 2555 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 VGLL3A8MV65 326 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 CIB2O75838 187 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 GATBO75879 557 aaKnown RBP13.08□□□□□ -0.32
CXCL12-206ENST00000395795 INMTO95050 263 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 UBCP0CG48 685 aaKnown RBP13.08□□□□□ -0.32
CXCL12-206ENST00000395795 ATF1P18846 271 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 DEFA6Q01524 100 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 LY6EQ16553 131 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 OR8H2Q8N162 312 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 CBR4Q8N4T8 237 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 OR11H6Q8NGC7 330 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 PP6455Q8WZ26 134 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 SNX22Q96L94 193 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 PLEKHA1Q9HB21 404 aa13.08□□□□□ -0.32
CXCL12-206ENST00000395795 TRBV2A0A0J9YWF9 115 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 BTBD17A6NE02 478 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 MMP23AO75900 390 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 HAND1O96004 215 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 RBP4P02753 201 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 ZNF728P0DKX0 622 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 JUNBP17275 347 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-206ENST00000395795 BCL3P20749 454 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 ATP6V1E1P36543 226 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 KIR2DS4P43632 304 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 CCR9P51686 369 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 ZNF146Q15072 292 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 ZNF626Q68DY1 528 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 KCTD20Q7Z5Y7 419 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 EGFL6Q8IUX8 553 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 ENTHD1Q8IYW4 607 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 TPRX1Q8N7U7 411 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 ASCC1Q8N9N2 400 aaKnown RBP13.07□□□□□ -0.32
CXCL12-206ENST00000395795 OR4S1Q8NGB4 309 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 FGGYQ96C11 551 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 BORCS8Q96FH0 119 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 MMP27Q9H306 513 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 TCF7L1Q9HCS4 588 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 MYRFQ9Y2G1 1151 aa13.07□□□□□ -0.32
CXCL12-206ENST00000395795 E9PI62 339 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 M0QZ24 198 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 TIMM23O14925 209 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 IGHV1-8P0DP01 117 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 CALCBP10092 127 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 AZGP1P25311 298 aaKnown RBP13.06□□□□□ -0.32
CXCL12-206ENST00000395795 DUSP1P28562 367 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 RBP2P50120 134 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 RAB13P51153 203 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 ACTC1P68032 377 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms