RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 SMCO3A2RU48 225 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 SYNGR3O43761 229 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 PRF1P14222 555 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 FABP4P15090 132 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 UBE2V2Q15819 145 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 TMEM42Q69YG0 159 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 RPL7L1Q6DKI1 246 aaKnown RBP8.95□□□□□ -0.98
HIF1A-203ENST00000394997 LPCAT3Q6P1A2 487 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 TMPPEQ6ZT21 453 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 LYG2Q86SG7 212 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 FGFBP3Q8TAT2 258 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 NELFAQ9H3P2 528 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 MMP26Q9NRE1 261 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 C7orf77A4D0Y5 90 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 H2BFMP0C1H6 154 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 TAGLN2P37802 199 aaKnown RBP8.95□□□□□ -0.98
HIF1A-203ENST00000394997 GSK3AP49840 483 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 SKA3Q8IX90 412 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 NKAIN3Q8N8D7 197 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 NRIP2Q9BQI9 281 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 OR51M1Q9H341 326 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 TMPRSS5Q9H3S3 457 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 HHLA2Q9UM44 414 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 TMEM269A0A1B0GVZ9 245 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 BPNT1O95861 308 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 MT-ND4LP03901 98 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 LSM6P62312 80 aaKnown RBP8.95□□□□□ -0.98
HIF1A-203ENST00000394997 FNDC9Q8TBE3 224 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 NAA11Q9BSU3 229 aaPredicted RBP8.95□□□□□ -0.98
HIF1A-203ENST00000394997 TM2D1Q9BX74 207 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 COA4Q9NYJ1 87 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 TNFSF18Q9UNG2 199 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 VPS13CQ709C8 3753 aa8.95□□□□□ -0.98
HIF1A-203ENST00000394997 RNF222A6NCQ9 220 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 BTBD17A6NE02 478 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 CRTAPO75718 401 aaPredicted RBP8.94□□□□□ -0.98
HIF1A-203ENST00000394997 SCAF4O95104 1147 aaKnown RBP8.94□□□□□ -0.98
HIF1A-203ENST00000394997 OPN1LWP04000 364 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 LYL1P12980 280 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 SLC6A9P48067 706 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 IDH3GP51553 393 aaPredicted RBP8.94□□□□□ -0.98
HIF1A-203ENST00000394997 HNF4GQ14541 408 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 CLEC12BQ2HXU8 276 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 JMJD6Q6NYC1 403 aaPredicted RBP8.94□□□□□ -0.98
HIF1A-203ENST00000394997 SLC30A7Q8NEW0 376 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 HPSE2Q8WWQ2 592 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 ROBO4Q8WZ75 1007 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 FGGYQ96C11 551 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 EHFQ9NZC4 300 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 LUZP4Q9P127 313 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 ACACBO00763 2458 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 FAM208BQ5VWN6 2430 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 ZNF503-AS2A6NEH8 195 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 AP4M1O00189 453 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 GNB3P16520 340 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 OR3A4PP47883 348 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 MOB3CQ70IA8 216 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 THRSPQ92748 146 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 SGK3Q96BR1 496 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 GNRHR2Q96P88 292 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 SCGB3A2Q96PL1 93 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 BANF2Q9H503 90 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 MRPS18CQ9Y3D5 142 aaKnown RBP8.94□□□□□ -0.98
HIF1A-203ENST00000394997 IGKV1D-8A0A087WSZ0 117 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 OR6C6A6NF89 314 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 B4E171 279 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 RCC1P18754 421 aaPredicted RBP8.94□□□□□ -0.98
HIF1A-203ENST00000394997 ACKR3P25106 362 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 CHATP28329 748 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 TSPAN7P41732 249 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 ASCL1P50553 236 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 HAGHQ16775 308 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 SNAI3Q3KNW1 292 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 MIDNQ504T8 468 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 SLC25A42Q86VD7 318 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 OR9K2Q8NGE7 335 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 OR5L2Q8NGL0 311 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 FAM71F1Q96KD3 344 aaPredicted RBP8.94□□□□□ -0.98
HIF1A-203ENST00000394997 SEC11CQ9BY50 192 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 FAM212BQ9NTI7 297 aaPredicted RBP8.94□□□□□ -0.98
HIF1A-203ENST00000394997 CRIM1Q9NZV1 1036 aa8.94□□□□□ -0.98
HIF1A-203ENST00000394997 A0A0U1RQV5 110 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 C9orf172C9J069 976 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 EIF1BO60739 113 aaKnown RBP8.93□□□□□ -0.98
HIF1A-203ENST00000394997 CD96P40200 585 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 EIF1P41567 113 aaKnown RBP8.93□□□□□ -0.98
HIF1A-203ENST00000394997 OR5AP2Q8NGF4 316 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 OR51E1Q8TCB6 317 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 DMXL2Q8TDJ6 3036 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 SPTBN1Q01082 2364 aaKnown RBP8.93□□□□□ -0.98
HIF1A-203ENST00000394997 A0A087X0M5 115 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 TRBV6-7A0A0A0MS04 114 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 A0A1B0GX30 115 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 PQLC2LA1A4F0 135 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 CXorf65A6NEN9 183 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 XRCC2O43543 280 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 MMP7P09237 267 aaPredicted RBP8.93□□□□□ -0.98
HIF1A-203ENST00000394997 VAMP2P63027 116 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 RAB32Q13637 225 aa8.93□□□□□ -0.98
HIF1A-203ENST00000394997 SPIN3Q5JUX0 258 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms