RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TSPO2Q5TGU0 170 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 TMEM42Q69YG0 159 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 OR10AD1Q8NGE0 317 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 SECTM1Q8WVN6 248 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 BORCS8Q96FH0 119 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 C18orf12Q96KH6 178 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 PARP12Q9H0J9 701 aaKnown RBP16.36■□□□□ 0.21
CBX1-202ENST00000393408 RNF122Q9H9V4 155 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 WFDC1Q9HC57 220 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 FSCN3Q9NQT6 498 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 SMCO4Q9NRQ5 59 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 PTRH2Q9Y3E5 179 aaKnown RBP16.36■□□□□ 0.21
CBX1-202ENST00000393408 KPTNQ9Y664 436 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 GEMIN2O14893 280 aaKnown RBP16.35■□□□□ 0.21
CBX1-202ENST00000393408 LCATP04180 440 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 PAX6P26367 422 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 NTF4P34130 210 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 KCNJ3P48549 501 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 FXYD4P59646 89 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 KRTAP27-1Q3LI81 207 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 PIGYQ3MUY2 71 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 LIAT1Q6ZQX7 453 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 M1APQ8TC57 530 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 SLC2A9Q9NRM0 540 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 TMEM38BQ9NVV0 291 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 WNT16Q9UBV4 365 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 CCDC187A0A096LP49 1063 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 OR6C6A6NF89 314 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 GPR137BO60478 399 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 SEC11BP0C7V7 166 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 FOLR2P14207 255 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 IL11RAQ14626 422 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 PHLDA2Q53GA4 152 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 BRICD5Q6PL45 260 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 SLC22A25Q6T423 547 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 C2CD4CQ8TF44 421 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 CRLF2Q9HC73 371 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 HS3ST3B1Q9Y662 390 aa16.35■□□□□ 0.21
CBX1-202ENST00000393408 MASP2O00187 686 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 CBR3O75828 277 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 KLF7O75840 302 aaPredicted RBP16.34■□□□□ 0.21
CBX1-202ENST00000393408 DIRAS3O95661 229 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 TSPAN15O95858 294 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 NRASP01111 189 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 DANCRP0C864 163 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 SNCAP37840 140 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 UCP2P55851 309 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 MIDNQ504T8 468 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 ETV3LQ6ZN32 361 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 ZFP82Q8N141 532 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 OSR2Q8N2R0 312 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 TMEM156Q8N614 296 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 CLDN23Q96B33 292 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 MSI2Q96DH6 328 aaKnown RBP16.34■□□□□ 0.21
CBX1-202ENST00000393408 C12orf57Q99622 126 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 GINS3Q9BRX5 216 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 SCRT1Q9BWW7 348 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 BCO1Q9HAY6 547 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 ZDHHC8Q9ULC8 765 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 BORCS7-ASMTA0A0B4J1R7 106 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 FAM221AA4D161 298 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 GJE1A6NN92 205 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 XRCC2O43543 280 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 DNPH1O43598 174 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 ZNF32P17041 273 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 PPT1P50897 306 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 B3GALT5-AS1P59052 145 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 RAC3P60763 192 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 HMGN3Q15651 99 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 GPR157Q5UAW9 335 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 LYSMD4Q5XG99 296 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 FBXL14Q8N1E6 418 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 COMMD1Q8N668 190 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 OR5L1Q8NGL2 311 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 AKR7LQ8NHP1 331 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 MR1Q95460 341 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 EGLN1Q9GZT9 426 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 CFAP54Q96N23 3096 aa16.34■□□□□ 0.21
CBX1-202ENST00000393408 PATE4P0C8F1 98 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 P2RY1P47900 373 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 RPS19BP1Q86WX3 136 aaKnown RBP16.33■□□□□ 0.2
CBX1-202ENST00000393408 C15orf54Q8N8G6 183 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 NAT6Q93015 286 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 IL36GQ9NZH8 169 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 SDK2Q58EX2 2172 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 NME2P1O60361 137 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 KLK3P07288 261 aaPredicted RBP16.33■□□□□ 0.2
CBX1-202ENST00000393408 DUSP1P28562 367 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 OR52M1Q8NGK5 317 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 CPT1CQ8TCG5 803 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 MOB3AQ96BX8 217 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 ZNF286AQ9HBT8 521 aa16.33■□□□□ 0.2
CBX1-202ENST00000393408 B4GALT1P15291 398 aa16.32■□□□□ 0.2
CBX1-202ENST00000393408 HTR5AP47898 357 aa16.32■□□□□ 0.2
CBX1-202ENST00000393408 UCP3P55916 312 aa16.32■□□□□ 0.2
CBX1-202ENST00000393408 MLF1P58340 268 aa16.32■□□□□ 0.2
CBX1-202ENST00000393408 CTAG1AP78358 180 aa16.32■□□□□ 0.2
CBX1-202ENST00000393408 HABP2Q14520 560 aaPredicted RBP16.32■□□□□ 0.2
CBX1-202ENST00000393408 ZNF468Q5VIY5 522 aaPredicted RBP16.32■□□□□ 0.2
CBX1-202ENST00000393408 Q6ZPA2 131 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms