RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PLA2G3Q9NZ20 509 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 VSIG4Q9Y279 399 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 AQP7P3A6NL99 342 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 RAB27BO00194 218 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 LRP3O75074 770 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 RPA2P15927 270 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 DDTP30046 118 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 EFNA3P52797 238 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 GNMTQ14749 295 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 DTWD2Q8NBA8 298 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 OR5L1Q8NGL2 311 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 CPT1CQ8TCG5 803 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 KIRREL1Q96J84 757 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 GPR27Q9NS67 375 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 ICE1Q9Y2F5 2266 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 TRAF3IP2O43734 574 aaPredicted RBP9.27□□□□□ -0.93
CALD1-203ENST00000393118 NRASP01111 189 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 PGA4P0DJD7 388 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 PGA3P0DJD8 388 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 SURF2Q15527 256 aaPredicted RBP9.27□□□□□ -0.93
CALD1-203ENST00000393118 SP6Q3SY56 376 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 PMS2CLQ68D20 193 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 ETV3LQ6ZN32 361 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 C17orf82Q86X59 251 aaPredicted RBP9.27□□□□□ -0.93
CALD1-203ENST00000393118 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.27□□□□□ -0.93
CALD1-203ENST00000393118 PCDH15Q96QU1 1955 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 MED19A0JLT2 244 aaPredicted RBP9.27□□□□□ -0.93
CALD1-203ENST00000393118 CYB5BO43169 146 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 DHRS3O75911 302 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 CCL2P13500 99 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 OR8G1Q15617 311 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 TMEM128Q5BJH2 165 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 SPINK14Q6IE38 97 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 SUMF1Q8NBK3 374 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 SLC30A7Q8NEW0 376 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 OR5T1Q8NG75 326 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 OR5M8Q8NGP6 311 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 FAAP24Q9BTP7 215 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 FAM206AQ9NX38 181 aa9.27□□□□□ -0.93
CALD1-203ENST00000393118 A0A0J9YW62 118 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 ZNF728P0DKX0 622 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 OR5H8P0DN80 308 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 RPL29P47914 159 aaKnown RBP9.26□□□□□ -0.93
CALD1-203ENST00000393118 ARG2P78540 354 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 FOXB1Q99853 325 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 TAF9BQ9HBM6 251 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 ZNF286AQ9HBT8 521 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 MMP26Q9NRE1 261 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 KCNS2Q9ULS6 477 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 AUP1Q9Y679 476 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 CACNA1DQ01668 2161 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 C7orf77A4D0Y5 90 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 EPHA1P21709 976 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 OMGP23515 440 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 DUSP1P28562 367 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 GPX4P36969 197 aaPredicted RBP9.26□□□□□ -0.93
CALD1-203ENST00000393118 RAC1P63000 192 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 IKZF1Q13422 519 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 MICBQ29980 383 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 FDX2Q6P4F2 183 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 SLC25A26Q70HW3 274 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 FBXL14Q8N1E6 418 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 OR10D3Q8NH80 312 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 FAM213BQ8TBF2 198 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 NPDC1Q9NQX5 325 aaPredicted RBP9.26□□□□□ -0.93
CALD1-203ENST00000393118 C1orf123Q9NWV4 160 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 COLQQ9Y215 455 aaPredicted RBP9.26□□□□□ -0.93
CALD1-203ENST00000393118 TIMM10BQ9Y5J6 103 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 HS3ST3B1Q9Y662 390 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 ZNF814B7Z6K7 855 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 NXPH3O95157 252 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 FSTP19883 344 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 RRADP55042 308 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 SLC22A25Q6T423 547 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 KDF1Q8NAX2 398 aaPredicted RBP9.26□□□□□ -0.93
CALD1-203ENST00000393118 HSD17B11Q8NBQ5 300 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 SEC11CQ9BY50 192 aa9.26□□□□□ -0.93
CALD1-203ENST00000393118 C5orf49A4QMS7 147 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 PHF1O43189 567 aaPredicted RBP9.25□□□□□ -0.93
CALD1-203ENST00000393118 IGHEP01854 428 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 HMGN3Q15651 99 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 MKXQ8IYA7 352 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 NFAM1Q8NET5 270 aaPredicted RBP9.25□□□□□ -0.93
CALD1-203ENST00000393118 OR1F12Q8NHA8 337 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 OR2V1Q8NHB1 315 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 PP6455Q8WZ26 134 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 ST3GAL6Q9Y274 331 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 CNOT4O95628 575 aaKnown RBP9.25□□□□□ -0.93
CALD1-203ENST00000393118 TAS2R60P59551 318 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 GAMTQ14353 236 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 ZNF695Q8IW36 515 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 ZNF610Q8N9Z0 462 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 POC1BQ8TC44 478 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 APC2O95996 2303 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 CCDC187A0A096LP49 1063 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 LIFP15018 202 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 TBPP20226 339 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 APLNRP35414 380 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 THBS4P35443 961 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 ZNF528Q3MIS6 628 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms